KEGG   Taeniopygia guttata (zebra finch): 100223747
Entry
100223747         CDS       T01082                                 
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
  KO
K19613  leucine-rich repeat protein SHOC2
Organism
tgu  Taeniopygia guttata (zebra finch)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_9 LRR_5
Other DBs
NCBI-GeneID: 100223747
NCBI-ProteinID: XP_030132250
Ensembl: ENSTGUG00000010686
LinkDB
Position
6:25324828..25390012
AA seq 582 aa
MSSNLGKEKDCKEKDPKVQSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSAIK
ELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgagtagtaatctaggaaaagaaaaggactgtaaagagaaggatccaaaagtccaatcg
tcaaaagaaagggagaaagaggcaaaggcctccggaggatttgggaaagagagcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacaataaaaagacctaatcctgccacaggt
actcgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattctatgcgcttggacttgtccaagaggtctatacacttgcttccatcagctatcaaa
gagctaacgcagttaacagaactttatttatacagtaacaaactgcagtgcctgcctgca
gaggtgggctgtctcgtgaacctggtgacgctggctctgagtgaaaactcactcaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcacaacaaa
ctgcgagaaatcccctcggtggtgtacaggctaagctccctcgccactctgtacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgggagaacaaaatcaaacaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagctgc
acgcagatcaccaaccttgacttgcagcacaatgaactcctggacctgccagaaaccata
ggaaatctgtccagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccc
aagtctttagcaaaatgcagtgaactcgatgagctgaacttggagaacaacaacatttct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacattggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacatctctccccttggatttcgggaca
tggacaagtatggtagaactgaatttagcgactaaccagctcacaaaaatccctgaggat
gtatctgggcttgtttctcttgaggttcttatcttgtcaaacaatctcctaaagaaactt
ccccatggaattggaaatctacggaaactccgagagttagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaac
aatcagctgaccacccttccaagaggaatcggtcaccttaccaatctgacgcaccttggg
ctcggagagaaccttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccgctcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccatatcgtgcc
atggtctga

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