Taeniopygia guttata (zebra finch): 100223747
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Entry
100223747 CDS
T01082
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tgu
Taeniopygia guttata (zebra finch)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
100223747
NCBI-ProteinID:
XP_030132250
Ensembl:
ENSTGUG00000010686
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Position
6:25324828..25390012
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AA seq
582 aa
AA seq
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MSSNLGKEKDCKEKDPKVQSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSAIK
ELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatctaggaaaagaaaaggactgtaaagagaaggatccaaaagtccaatcg
tcaaaagaaagggagaaagaggcaaaggcctccggaggatttgggaaagagagcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacaataaaaagacctaatcctgccacaggt
actcgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattctatgcgcttggacttgtccaagaggtctatacacttgcttccatcagctatcaaa
gagctaacgcagttaacagaactttatttatacagtaacaaactgcagtgcctgcctgca
gaggtgggctgtctcgtgaacctggtgacgctggctctgagtgaaaactcactcaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcacaacaaa
ctgcgagaaatcccctcggtggtgtacaggctaagctccctcgccactctgtacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgggagaacaaaatcaaacaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagctgc
acgcagatcaccaaccttgacttgcagcacaatgaactcctggacctgccagaaaccata
ggaaatctgtccagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccc
aagtctttagcaaaatgcagtgaactcgatgagctgaacttggagaacaacaacatttct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacattggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacatctctccccttggatttcgggaca
tggacaagtatggtagaactgaatttagcgactaaccagctcacaaaaatccctgaggat
gtatctgggcttgtttctcttgaggttcttatcttgtcaaacaatctcctaaagaaactt
ccccatggaattggaaatctacggaaactccgagagttagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaac
aatcagctgaccacccttccaagaggaatcggtcaccttaccaatctgacgcaccttggg
ctcggagagaaccttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccgctcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
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