Taeniopygia guttata (zebra finch): 100225405
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Entry
100225405 CDS
T01082
Symbol
HCFC2
Name
(RefSeq) host cell factor 2 isoform X2
KO
K27390
host cell factor 2
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100225405 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100225405 (HCFC2)
03029 Mitochondrial biogenesis [BR:
tgu03029
]
100225405 (HCFC2)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
100225405 (HCFC2)
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100225405 (HCFC2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_1
Kelch_4
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
100225405
NCBI-ProteinID:
XP_012424634
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All DBs
Position
1A:complement(52662270..52681490)
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AA seq
803 aa
AA seq
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MAAGAAGLSWRRVSSFTGPVPRSRHGHRAVAIRELLIIFGGGNEGIADELHVYNTVTNQW
FLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNDLYELQASRWLWKKVKPQAPS
NGSPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSI
PVTKGILPSPRESHTAIVYCRKDVGSPKMYIFGGMCGCRLNDLWELDIETMTWSRPETKG
TVPLPRSLHTANVIGNKMYVFGGWVPQSAGGEISAPDGEWKCTGSFSYLNLDTTEWIGLI
SDCQEDKSNLLPGPRAGHCAVAVGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDTERPLAP
SQVQLIRATTNSFQLKWDEVPTVEGYLLQLHADSPVPPVAGIPGTGVPETAVLSSQGGCS
LHQSPQSLSSVPYPEMKVDHPSQANNLIPNNVQVALSSSSKVEGKEKVAAPENKVTQETL
KNHTDATGFKESNAPSVLPVCTSSAQTSANVGELHALDKQSVNPDASVSSTVSSAQTMVT
QQAVKTESSSTNGAVVKDETSLTTFNSKSEAAETAYVMPSTRVNTGQTNDSHSSRAAQRP
PVKTRDRRWYDVGIFKNNTAVVSQFYLLPEETLNINSKTEGADVPDYRLLKKQDLFPGTV
YRFRVAAINGCGVGPFSKISEFKTCIPGFPGAPSTVKITKSVDCIHLSWEPPASPSGNIL
EYSAYLAIRSTQLQENPNQLVFMRIYCGLKTSCIVTAAQLSNAHVDYTSRPAIVFRISAK
NERGYGPATQVRWLQDMKASGSK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgccgccgggctgagctggaggcgggtgtcctccttcacggggccggtg
ccgcgctcccgccacgggcaccgcgcggtcgccatccgagagctgctcatcatcttcggc
ggcggcaacgagggcatcgccgacgagctgcacgtctacaacacggttacgaatcaatgg
ttccttcctgctgtaaggggagatattcctccaggctgtgcagcacatggatttgtttgt
gatggtaccagaatattagtttttggaggaatggttgaatatggaagatacagcaatgat
ttatatgaattgcaggcaagtcgatggctctggaaaaaagtaaaacctcaagctccttca
aatggatcaccaccctgtcctcggcttggccacagcttttctttgtatggtaacaagtgc
tatttatttggtggcctggcaaatgaaagtgaagattcaaataataatgttcccagatat
ttaaatgatttctatgaactggagctgcaacatgggtctggcgtggtcggctggagtatt
cctgttaccaaaggaatcttgccatctccccgagaatctcacacagccatagtgtactgc
agaaaagatgtgggaagcccgaagatgtatatttttggaggcatgtgtggctgtcggctt
aatgatctctgggaacttgacatagaaaccatgacctggtcaagaccagaaaccaaaggg
acagtaccacttcctcgcagtctccatacggccaatgtaataggaaacaaaatgtatgtt
tttggtggatgggttccacagtcagcaggaggtgaaatttctgctcctgatggtgaatgg
aaatgcaccggttccttttcttaccttaatttggataccacagaatggataggtctgatc
tcagattgccaggaagacaaaagtaacttgttaccagggccaagagcaggacactgtgct
gtagctgttggcactcgtctgtatatctggagtggtagagatggctacagaaaagcttgg
aacaatcaagtttgctgcaaagatctttggtaccttgatactgagagacctctagcacca
tcacaggtacagctgatcagagctacaaccaactcttttcaattgaagtgggatgaagta
cctacagttgaaggatatcttcttcaattacatgctgactcaccagtgccaccggtggct
ggaattcctggtactggcgttcctgagacagcagtgctgagttcacaaggtggctgttct
ctccatcagagtccacaatcattgtctagtgtcccttatccagaaatgaaggtggatcat
cccagccaagcaaataatctcattcctaataacgtccaagttgccctttcatccagttca
aaagtagaaggaaaagaaaaggttgcagcacctgaaaacaaggttacacaggagactctg
aaaaaccacacagatgctacaggattcaaagaatcaaatgccccttccgttttgcctgtt
tgtacttcaagtgctcagacatcagcaaatgtaggtgaattacatgccttggacaaacaa
agtgtaaatcctgatgcttctgtatccagtactgtctccagcgcacaaactatggtaacc
cagcaggctgttaaaactgaatcatcaagtacaaatggggcagttgttaaagatgaaact
tcactaacaacattcaattcaaaatctgaagctgctgaaactgcttatgtcatgccttca
acaagggtcaatactggacagacaaatgattcacactcttctagagctgcccagaggccg
ccggtgaaaaccagggaccgccggtggtatgatgtgggaatttttaagaacaacactgct
gtggtgagccagttctacttgctgccagaggaaacactgaacatcaacagcaagacggaa
ggtgcagatgtaccagactacagattacttaagaaacaggatctgtttccaggcacagta
tacaggttcagagttgctgcaattaatggctgtggtgttgggcctttcagtaaaatcagt
gaattcaagacatgcattccaggttttcctggagctccttcaactgtcaaaattaccaag
agtgtagactgtattcatctttcttgggagcctcctgcttcaccctctggaaatatttta
gaatattctgcctacttagccatccgttccacgcaattacaggaaaatccaaatcagctt
gtatttatgaggatatactgtggtcttaaaacctcctgcatagtgactgctgcccagctt
tccaatgcccacgtggattacacctccaggcctgccatagtgttcaggatttcggccaag
aacgagagaggctacggcccggccacgcaggttcggtggctccaagatatgaaagcatca
ggctcaaagtag
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