Taeniopygia guttata (zebra finch): 100227014
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Entry
100227014 CDS
T01082
Symbol
IL1B
Name
(RefSeq) interleukin-1 beta isoform X2
KO
K04519
interleukin 1 beta
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04010
MAPK signaling pathway
tgu04060
Cytokine-cytokine receptor interaction
tgu04217
Necroptosis
tgu04620
Toll-like receptor signaling pathway
tgu04621
NOD-like receptor signaling pathway
tgu04623
Cytosolic DNA-sensing pathway
tgu04625
C-type lectin receptor signaling pathway
tgu05132
Salmonella infection
tgu05164
Influenza A
tgu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100227014 (IL1B)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100227014 (IL1B)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100227014 (IL1B)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100227014 (IL1B)
04621 NOD-like receptor signaling pathway
100227014 (IL1B)
04623 Cytosolic DNA-sensing pathway
100227014 (IL1B)
04625 C-type lectin receptor signaling pathway
100227014 (IL1B)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100227014 (IL1B)
05168 Herpes simplex virus 1 infection
100227014 (IL1B)
09171 Infectious disease: bacterial
05132 Salmonella infection
100227014 (IL1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tgu04052
]
100227014 (IL1B)
00536 Glycosaminoglycan binding proteins [BR:
tgu00536
]
100227014 (IL1B)
Cytokines and neuropeptides [BR:
tgu04052
]
Cytokines
Interleukins
100227014 (IL1B)
Glycosaminoglycan binding proteins [BR:
tgu00536
]
Heparan sulfate / Heparin
Cytokines
100227014 (IL1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL1
IL1_propep
Motif
Other DBs
NCBI-GeneID:
100227014
NCBI-ProteinID:
XP_002195600
LinkDB
All DBs
Position
22:complement(4593950..4596181)
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AA seq
269 aa
AA seq
DB search
MAFVPDLDTLESSSLNEETFYGPNCLCPQKKPRLDLEGTSPGVGIQVTVTKGPLSRTFRQ
AAVLVVAVTKLLKQPSRKDFADSDLGSFLDDIFEPVSFRCIRGSYTRAPVFRYTRSQSFD
ILDIDHKCFVLESPTQLVALHLQGPSAGQKVKLNIALYRPRPSQGSPGSGRMPVALGIKG
YQLYMSCVMSGTKPVLQLEEADIRRDIESVELTRFIFYRLDSPSEGTTRFESAAFPGWFV
CTSLQPRQPVGITNTPDQVNIATYELSGR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgtccctgatttggacacactggagagcagcagcctcaatgaggagacattt
tatggccccaactgtctgtgcccacagaagaagccccgactggacttggaggggacatcg
cctggggtgggcatccaggtgacagtgacaaaaggacccctttccaggacctttcgccag
gctgctgtcctggtggttgctgtcaccaagctcctaaagcagccatcacgcaaggacttt
gctgatagtgaccttggcagcttcttggatgatattttcgagcccgtctccttccggtgc
atcagaggcagttataccagggcacctgttttccgctacactcgctcccagtccttcgac
atcctggacattgaccacaagtgcttcgtgctggagtcacccacccagctggtggcccta
cacctacagggaccttctgctggacagaaagtgaagctcaacattgctctgtaccgtccc
cggccatcgcagggcagtccagggtctggaaggatgccggtggcattgggtatcaagggc
taccagctctacatgtcatgtgtgatgagtggcaccaagcccgtgctgcagctggaggaa
gctgacatcaggagggatattgagagtgtggagctgacccgcttcatcttctaccgcctg
gacagcccatctgaggggaccacccgcttcgaatcggccgctttccctggctggttcgtt
tgcacatccctgcagccccgccagcctgtcggcatcacaaacaccccagaccaggtgaac
attgctacctatgagctgagtgggcgctga
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