Taeniopygia guttata (zebra finch): 100227195
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Entry
100227195 CDS
T01082
Symbol
SHROOM3
Name
(RefSeq) protein Shroom3 isoform X2
KO
K18625
protein Shroom
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgu04812
]
100227195 (SHROOM3)
Cytoskeleton proteins [BR:
tgu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
100227195 (SHROOM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASD2
ASD1
Motif
Other DBs
NCBI-GeneID:
100227195
NCBI-ProteinID:
XP_030128045
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Position
4:complement(66883912..66961931)
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AA seq
1833 aa
AA seq
DB search
MMQISQGTLGTPWHQSYHSSSSTSDLSAYEHGYLRRSPDQYSSRGSMESLDHSSPAYHPC
HLSPAKSTNSIDQLSHLHSKRDSAYSSFSTNSSIPEYPVAPLGKEHSCSLDSAQSRGGLP
EGMRQADIRYVRTVYDAQQRISQEYEVKPSALLPGADGRGHSRLHAFSRPNAASSWAQPA
QGPSDSKSQPSKGPPLPPARSDSYAAIRHHERPGSGTGLEPNKPGRTQPKGAWAPLVSSL
SQGPLLKPPFGEGHLHTVVEKSPESSPTTKAKQSYSQAAQPGQPLLPTGVYAVPSPEPHY
AQVPRPSAGSTGTLYPALAKESGYSTALPVSCDKAVASSTLGLDENGNQSTTNRSTIFYQ
PPATERKHEAKLIQQKPPSAAGLELSLAVSRKEELLPLYKAAHSHQETTGTTQASKPIFQ
GPQPQLRDASERKTHYQPKEDWTPGSQEEKNGSTQVNERDAGAAHPWGHSKPKQYGFSSL
QNIPESSRRQSSSELRETQLGEGYSNTKLSFLNSSSREEKDHREQGHRQWSDVDPQAFTR
QEEEGTSVVLFHAAEPKSKETPSPQLPKTSDFGRSRLSSSSTQSFPYSKPEAGKLHCSVL
EKVNKFEQREQSAPWPQSAGVPSFGQHYGPSRTSQPSGMRCSVHSPEDMRNKLPSEPGRG
SSPSVRNGKVEEADWRPVELQMVASVKQARPSEYYSLCPENEVQIRAAQLPRSRSTFQLG
GEPEKEILWKDNVQDAHGSQLDTLFNRAYRNSIKDAQSRVLRATSFRRISPPFGNTPKKV
PQRPASAHVGMRSTVVSPHTPKERHSITPTEGGFSSLDYTRTQHVLRIGGRKRLTAEQKK
RSYSEPEKMNQVGISDGEPSPFSFQKKSIHFIFPENTVADRRKIFERDGKASSTASLSKP
ELKQLQQNALADYIERKMGRRPSSQDMGLLRERSHSSYLQLGGPDSQSLSSASSMNSLQD
QNLYRRRESIERISRTGRMSSTLPPGLTDYLDTSGDEKVPGRQDSLVTSRPKAERCRDYR
PRSDLTKGTQTDLLGMQGQPRYRKQEQVFETPSTARKSGKSVSVEDLLDRYDNQPVPVHI
RSRSSPTADKKHQELLRRESSEFGPMVRDPFYVVSAGARSFSKKERSHSEKMAFTSYYPH
PLRSTEVVAGPPPLVENHKLSELSRPDSRTSAFFPVPTEARSHYPEQKQGFKPLFLNLTP
SGPGHSSPNTPAQAPSDLQSTADRQHHAKREAVPPEGTQAQSLDAVQDRSPETPTEEMMW
RRKAGLLHRSLPPKVAWAHSAKDSGYARAMVSPPAAGPKPSQRWQSLPTQSSTSSDPETP
SPQAMTQLRISESGLQLTPPPSLQDEEDDEVFIAPSQPPFSPPPPSHPLPELSSCTSPNG
TEEFPPPPPPAEGNGAAGDKSPRLPEEAGVSFKSFPKAFPAKREITGLGTSTGENNWPTP
LKRTGSPSAVDQQHQSPASPEGPQSTDRQPITHPEGNPREPALENASLDSMITSTVKAKN
KTPEDIKSEALAKEIVHKDKSLADILDPDSKMKTTMDLMEGIFPGGTSVLKENNMKRKML
QTQASRTAVAGDTREGKEAPVTLVTCPAYYSVSAPKAELLNKIKDLPEEVGEEEELLDIN
EKKAELIGSLTHKLEILKEAKEGLLADIKLNNALGEEVELLISTLCKPNEFDKYKMFIGD
LDKVVNLLLSLSGRLARVENVLSSLGDNANSEERSSLNEKRKLLAGQHEDARELKENLDR
RERVVLDILGNYLSEEQLQDYQHFVKMKSALLIEQRELDDKIKLGQEQLKCLMESLPTDF
TPRDAAAAAALAAALATSSGLGGKTPPAASSSL
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaatatctcagggtacgcttggcaccccttggcatcagtcctaccactccagc
tcttccaccagtgatctctctgcgtacgagcatggctatctgaggaggagccccgatcag
tacagctcccggggcagcatggagagcttggaccactcctcccctgcctaccacccttgc
cacctgtccccggccaaatccaccaacagcatcgaccagctctcccacctccacagcaag
agagactctgcctacagctccttctccaccaactccagcatccccgagtaccccgtggct
ccactgggcaaggagcactcgtgctccctggacagcgcgcagtcccgcggggggctgccg
gagggcatgaggcaggcggacatccgctacgtccggacggtctacgacgcccagcagcgc
atctcccaggagtacgaggtgaagccctcggccctgctccccggcgctgatggccgcggc
cacagcaggctccacgccttcagccggcccaacgctgcctcctcctgggcacagccagcg
cagggcccctcggacagcaagagccagccctccaaggggccgcccctgcctcccgctcgc
agcgacagctacgcggccatcaggcaccacgagaggcccggctcaggcaccggccttgag
cccaacaagcccggccggacccagccaaaaggggcctgggcaccgctcgtcagctccctg
tcccaggggccgctgctgaaaccgcccttcggagaagggcacctgcacaccgtggtggag
aagagcccagagagcagccccaccacgaaggccaagcagagctattcccaggcggcccag
ccagggcagcccctgctgcccaccggtgtctacgccgttccctccccagagccgcactac
gcccaggtgccccggccttccgccggcagcaccgggacgctttacccagctctggccaaa
gaaagtgggtactccacagccctcccggtctcctgtgacaaggctgtagccagcagcacc
ctgggtttggatgagaatggaaaccaaagcactacaaacaggtcgaccatcttctaccag
ccccctgccactgagagaaagcacgaagccaaactcatccagcagaaacctcccagcgca
gcaggcctggagctcagcctggctgtgtcacgaaaggaggagctgctacccctttacaag
gcagcacacagccaccaagagaccacgggtaccacacaggcctccaagcccattttccag
ggtccacaaccccagctgagggatgctagtgagaggaaaacccattaccagcccaaagag
gactggacacctggatcccaggaggagaaaaatggcagcacacaggtaaacgagagagac
gctggggctgcccacccatggggtcacagcaagcccaagcagtatggcttctcttccttg
cagaacatcccagagagctccaggaggcaaagcagctctgagcttagggagacgcaactg
ggtgagggttattccaacaccaaactgtccttcctgaacagcagcagcagagaggagaag
gatcacagggaacaggggcacaggcagtggagtgatgtggacccccaggccttcacgagg
caggaggaggagggcacgagtgtggttctgttccatgctgctgagccaaagagcaaagag
accccttctcctcagctcccaaagacctcggatttcgggaggagccggctcagctctagc
agcacccaaagctttccctacagcaaaccagaggctggtaagctccactgctcggtgctg
gagaaagtcaacaagtttgagcagcgggagcagagcgctccctggccccagagcgctggc
gttccgagctttggccagcactatgggccaagcaggacgagccagccttccggcatgagg
tgctctgtgcacagcccggaggacatgaggaacaagctgcccagtgagccaggcaggggc
tccagcccatctgtcagaaacgggaaggtggaagaggctgactggcgccccgtcgagctg
cagatggtggcttcggtgaagcaggcaagacccagtgagtactacagcctgtgtcctgaa
aacgaggtgcaaataagggcagctcagcttccacggagtagaagcacattccagctggga
ggcgagcctgagaaggagatcctctggaaggataatgtccaggacgcacacgggtcacag
ctggacacgttgtttaacagggcctacaggaacagtatcaaagatgcccagtccagggtg
ctgagggccacctccttccggcggatcagccccccatttgggaacacgcccaagaaggtg
ccccaaagacctgcctcggcccacgtgggcatgaggagcacggtggtgtccccacacacc
cccaaggagaggcacagcatcacacccacagaaggaggcttctccagcctggactacacc
aggacgcagcacgtgctgcgcatcgggggccggaagcggctgacggcggagcagaagaag
cgctcctactcagagcctgagaagatgaatcaggtgggcatctcagatggggagccgtca
cctttctccttccagaagaaaagcatccactttatcttcccagagaacacggtggccgac
cggcgcaagatctttgaaagggatggcaaagcttcctccacagccagcctgtccaagcca
gagctaaagcagctccagcagaacgccctggccgactacatcgagcgcaaaatggggcga
cgaccatcctcgcaggacatggggctgctccgggagcgctcccacagctcctacctgcag
ctgggtggccccgacagccagagcctttcctccgcctccagcatgaattccctccaggac
cagaacctgtaccgccgcagagagtccatagagcggatatccaggacaggaaggatgtct
tccacccttccccctgggctgacggactacttggacacgagcggagatgagaaggtgcca
ggacgccaggacagcctggtcaccagccggcccaaagcagagaggtgccgggattacaga
cccagatcggatctcaccaaaggcacgcagacagacctgctgggtatgcagggccagcct
cgctacaggaagcaggagcaggtctttgaaaccccctccactgccaggaaatctgggaaa
tcggtgtctgtggaagacttgctcgataggtacgacaatcagccggtccctgtccacata
cgttccaggtcatctcccacagcggataagaagcaccaggagctgctgagaagggagagc
agtgagttcggccccatggtgagggatcctttctacgtggtcagcgcaggagccaggtct
ttcagcaagaaagaaagaagccactcagagaaaatggcgttcacaagttactatccccat
cccctccgcagcacagaggttgtcgccgggcctcccccgctggttgagaatcacaagctc
tcagaactttccagaccagatagcaggacttctgcatttttcccagtcccaacagaggca
aggagtcactatcctgagcaaaagcaaggctttaaacccttgttccttaaccttactcct
tctgggcctggccactcttcccctaatacacccgctcaggctccctcagacttgcagagc
acagctgacagacagcaccatgccaaacgagaggctgttccccctgagggcactcaggca
cagtctctggatgctgtccaggacagatcccccgagactcccacggaagagatgatgtgg
aggaggaaagcggggctgctgcacaggtccctcccgcccaaagtggcgtgggctcattcg
gccaaagacagcggctacgccagggccatggtgtctcctccggcagccgggccaaagccc
tcccagaggtggcagtccctgcccacgcagagcagcacttcctccgacccagagactcct
tctccccaggccatgacccagctccggatctcggagtcggggctgcagctcacacccccg
ccatcgctgcaggacgaggaggacgacgaggtgttcatcgcaccttcccaaccgcccttc
tccccgccaccgccatcccatcctcttcctgagctcagctcttgcacttctcccaacggc
actgaggaattcccacctcctccccctcctgctgaggggaacggggcagctggagacaaa
tccccccggctcccagaggaggccggcgtgagcttcaaaagctttcccaaagctttcccg
gccaagagggagataacagggttgggcaccagcaccggtgaaaataactggccaacccca
ttaaagaggactggctctccatctgctgtggatcagcagcaccagtcccctgcttctcca
gaagggcctcagagcactgacagacagcccataactcatcctgaaggtaaccccagagag
ccagcattggaaaatgccagcctggactccatgataaccagcacagtgaaggcaaagaac
aagactccagaggatattaagtcagaggctctagcaaaagaaattgtccacaaagacaag
tctctggctgatatcctggatccagattccaaaatgaaaacaaccatggacttgatggaa
gggatcttccctggtggaaccagtgtgctgaaggagaacaacatgaagaggaagatgttg
cagacacaagccagcaggacggcagtggcgggtgacacgagagagggaaaggaagctccc
gtcaccctggtcacctgtcccgcttactacagcgtttcagcacccaaagcagaactgctg
aataaaatcaaggacttgccagaagaagtaggtgaggaggaagagctgctggacatcaat
gaaaaaaaggctgagctcatcgggagcttgacccacaaactggaaatcctgaaggaagcc
aaggagggcctgctcgctgacattaagctgaataatgctctcggagaggaggtggagctg
ttgatcagcacgctgtgcaaacccaacgagtttgacaagtacaagatgttcattggcgat
ctggataaggtggtgaacctcctgctctccctctcgggacgcctggcccgcgtggagaat
gtcctgagcagcctgggggacaatgccaacagtgaggagcggagttcactgaacgagaag
aggaagctgctggctggccagcacgaagacgcccgggagctaaaggaaaacctcgaccgt
cgggaacgggtggtcttggacatcctgggcaactacctctctgaggagcagctccaggac
taccagcactttgtgaagatgaagtctgcgctcctcatagagcagcgagagctcgacgac
aaaatcaaactgggccaggagcagctcaagtgcctgatggaaagtctccccacggacttc
acgcccagggatgcagcagcagctgctgccctggctgcagcacttgctacctcctccggg
ctcggtggtaaaacacctccagcggcctcttcctcgctctaa
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