Taeniopygia guttata (zebra finch): 100228079
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Entry
100228079 CDS
T01082
Name
(RefSeq) pinopsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tgu04030
]
100228079
G protein-coupled receptors [BR:
tgu04030
]
Rhodopsin family
Vision
Opsin
100228079
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
7tm_4
7TM_GPCR_Srsx
BCLP
7TM_GPCR_Sru
TAS2R
7TM_GPCR_Srh
Motif
Other DBs
NCBI-GeneID:
100228079
NCBI-ProteinID:
XP_002198943
Ensembl:
ENSTGUG00000007365
LinkDB
All DBs
Position
19:complement(2722785..2726264)
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AA seq
348 aa
AA seq
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MDSSQEPPNSSTPGPFDGPQWPHQAPRATYLAVAVLMGLVVALASLLNGLVIVVSVRHKR
LRSPLNYILLNLAVANLLVTLCGSSVSLSNNISGFFVFGERLCQLEGFMVSLTGIVGLWS
LAILALERYLVVCRPLGDFRFQQQHAASGCAFTWGWSLLWTTPPLLGWSSYVPEGLRTSC
GPNWYTGGSNNSSYILALFVTCFVMPLSLILFSYTNLLLTLRAAAARQQESDTTQQAERE
VTRMVVAMVVAFLTCWLPYATFALVVATHKDIVIQPALASLPSYFSKTATVYNPIIYVFM
NKQFQSCLLGMLCCGHHPRGMGKTSPAAPSPQVAAEGLRNKVTPSHPV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagccaggagcccccaaacagcagcaccccggggccttttgatggccctcag
tggccccaccaggccccccgggccacctacctggcggtggccgtgctgatggggctggtg
gtggccttggcctcgctgctcaacgggctggtcatcgtggtgtccgtcaggcacaagcgg
ctgcgctcgcccctcaactacatcctgctgaacttggccgtggccaacctgctggtgacg
ctctgtggcagctccgtcagcctctccaacaacatcagcggcttcttcgtgtttggggag
cggctctgccagctggagggcttcatggtgtccctgacaggcatcgtggggctgtggtcc
ctggccatcctggccttggagaggtacctggtggtctgcagacccctgggagactttcgg
ttccagcagcagcacgctgccagtggctgtgccttcacctggggctggtccctgctctgg
acaaccccaccactcctgggctggagcagctacgtgcctgaaggcctgagaacctcctgc
gggcccaactggtacacgggtggcagcaacaacagcagctacatcctggccttgtttgtc
acctgctttgtgatgcccctcagcctgatcctcttctcctacaccaacctgctgctgacc
ctgcgggcggccgcggcgcggcagcaggagtcggacacgacgcagcaggcggagcgggag
gtgacgcgcatggtggtggccatggtggtggccttcctcacctgctggctgccctacgcc
acctttgcactggtggtggccacccacaaggacattgtcatccagccagccctggcatcc
ctgccctcctacttctccaagacggccacggtttacaaccccatcatctatgtcttcatg
aacaaacagttccagagctgcctgctgggaatgctgtgctgtggtcaccacccccggggg
atggggaaaacttctccagctgcccccagtccccaggttgctgcagaggggctgaggaac
aaggtgacaccatctcaccccgtgtga
DBGET
integrated database retrieval system