Taeniopygia guttata (zebra finch): 100228958
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Entry
100228958 CDS
T01082
Name
(RefSeq) F-box/WD repeat-containing protein 7
KO
K10260
F-box and WD-40 domain protein 7
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100228958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100228958
04121 Ubiquitin system [BR:
tgu04121
]
100228958
Membrane trafficking [BR:
tgu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
100228958
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
100228958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
F-box-like
ANAPC4_WD40
Nup160
NBCH_WD40
HHH_3
F-box
Ge1_WD40
PQQ_2
CDtoxinA
Ribosomal_60s
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
100228958
NCBI-ProteinID:
XP_030140810
LinkDB
All DBs
Position
1:complement(114225099..114232281)
Genome browser
AA seq
742 aa
AA seq
DB search
MSGPGPAGAKLDINRAGVAELEGALSGIGRRRARGIVRKREELKGFTCLDDLLHVKGITT
RILELNSQRMTCRRCPEGPPRASPTPLGDSEDHRAPAAQVVAEEEEEEEEEAPEPWEPER
PWKDTPRSGADPDGSGGRGPQEPPRSTREEEEEEEEEEEEGSCCSEEGEDSSNVYLYYTL
GERWIDYLQRTGDGGLLRHLRPKMKRKSENGPDGRALSPGKKLCKGSDYGRTLGPCTPSP
TTTFGDLRNAKVGQARRRHIPSVAPPPELQDWLRTFQRWSGPEKLLALDELIDRCEPAQI
KYMMQVIEPQFQRDFISLLPKELALYVLSFLEPRDLLRAAQTCRYWRVLAEDNLLWREKC
REEGIEEPLHLRKRRLLSPGFMYSPWKFAFLRQHRIDMNWRSGELRPPKVLKGHDDHVIT
CLQFCGNRIVSGSDDNTLKVWSAVTGECVQTLVGHTGGVWSSQMRDSIVISGSTDRTLKV
WNADSGECVHTLYGHTSTVRCMHLHGNRVVSGSRDATLRLWDIETGQCLHVLMGHVAAVR
CVQYDGNKVVSGAYDYTVKVWDPESESCTHTLQGHTNRVYSLQFDGTHIVSGSLDTSIRV
WDVESGNCLHTLMGHQSLTSGMELRDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQS
AVTCLQFSSKFVVTSSDDGTVKLWDLKTGEFVRNLVALESGGSGGVVWRIRASNTKLVCA
VGSRNGTEETKLLVLDFDVDLK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggccgggccccgccggggccaagctcgacatcaaccgcgctggcgtggccgag
ctggagggcgccctcagcggcatcggccggcgccgtgcccgcggcatcgtccgcaagaga
gaggagctgaagggcttcacttgcttggatgacctgctgcacgtcaagggcatcaccaca
cgcatcctggagctcaacagccagcgcatgacgtgccggcggtgccccgaggggcccccg
cgagccagccccactcccctgggggacagtgaggaccacagggcacctgcggcacaggtg
gtggctgaagaggaggaagaggaggaggaggaggcaccagagccctgggagccagagcgc
ccctggaaggatacccccaggtccggagcagaccctgatggttctggggggcggggacca
caggagccccccaggtccaccagggaggaggaggaggaagaagaggaggaggaggaagaa
gggagctgctgcagcgaggagggggaagacagcagcaacgtatacctgtactacaccctg
ggcgagcgctggatcgactacctgcagcgcactggggatggggggctgctgcggcacttg
cgccccaagatgaagcggaagtcagagaatggcccagatggccgggccttgtcgcctggg
aagaagctgtgcaagggctctgactatggcaggacgctgggtccctgtacacccagcccc
acgaccacctttggggacctgcgcaacgccaaggtggggcaggcccggcgccgccacatc
ccctcggtggcacccccacctgagctacaggactggctccgcaccttccagcgctggagt
ggccctgagaagcttctggccctggatgagctcattgaccgctgcgagccagcgcagatc
aagtacatgatgcaggtcatcgagccccagttccagcgcgacttcatctccctgctgccc
aaggagctggccctgtacgtcttgtctttcctggagccacgggacctgctccgtgctgcc
cagacttgccgttactggagagtcctggctgaggacaacctgctctggagggagaagtgc
cgtgaggaagggatcgaggagcccctacacttgaggaagcgacgcctgctcagtcctgga
ttcatgtacagcccctggaaattcgccttcctgcgccagcaccgcatcgacatgaactgg
cgcagtggggagctgcggccccccaaggtactgaagggccacgacgaccatgtgatcacc
tgcctgcagttctgtgggaatcgcatagtaagcggctctgatgacaacacactcaaagtg
tggtcagctgtcacaggggagtgtgtgcagacgctggtgggccacactgggggggtttgg
tcctcccagatgagggacagcattgtcatcagtggctccactgaccgcacactcaaggtg
tggaacgctgacagcggcgagtgcgtgcacacgctgtacggacacacctccaccgtgcgc
tgcatgcacctgcacggcaacagggtggtgagcggctcgcgggatgccacgctgcggctc
tgggacatcgagacagggcagtgcctgcatgtgctgatgggccacgtggcagccgtgcgc
tgcgtccagtatgacggcaacaaggtggtcagtggtgcctacgactacacagtcaaggtg
tgggaccccgagagcgagagctgcacccacacgctgcaggggcacaccaaccgtgtctac
tcactgcagtttgatgggacacacatcgtgagtgggtccctggacacatcaatccgcgtg
tgggatgtggagagtgggaactgcctgcacacgctcatggggcaccagtcactcaccagc
gggatggagctgcgtgacaacatcctggtgtccggcaatgccgattccaccgtcaagatc
tgggacatcaagacggggcagtgcctgcagacgctgcagggtcccagcaagcaccagagt
gccgtcacctgcctgcagttcagctccaagttcgtggtgaccagctcggatgacgggaca
gtgaagctgtgggacctgaagacgggggagtttgtgcgaaacctggtagccctggagagc
gggggctcggggggggtggtgtggcgcatccgtgcctccaacacaaagctggtgtgtgcc
gtgggcagccgcaatggcaccgaggagaccaagctgctggtgctggacttcgatgtggac
cttaagtga
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