Taeniopygia guttata (zebra finch): 115491703
Help
Entry
115491703 CDS
T01082
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115491703 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
115491703 (SMARCA4)
03036 Chromosome and associated proteins [BR:
tgu03036
]
115491703 (SMARCA4)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115491703 (SMARCA4)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
115491703 (SMARCA4)
Chromatin remodeling factors
BAF complex
115491703 (SMARCA4)
PBAF complex
115491703 (SMARCA4)
GBAF(ncBAF) complex
115491703 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
115491703
NCBI-ProteinID:
XP_032601506
LinkDB
All DBs
Position
Unknown
AA seq
1613 aa
AA seq
DB search
MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHSGHALPAPGYAPDSIHP
LHKPLEAMHEKGMSEDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGYPSPLGGSEHAS
SPVPSNGPSGGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQP
LPEHLQVAVQGKRPLPGMQPQIPTLPPPAGAAQGPGPAPGAGPAPPGYSRPHGIGGPNMP
PPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPAS
PGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELEN
LPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSL
REARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATY
HANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTEL
VRQHKAAQVAKEKKKKKKKKKAENAEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKI
LTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKK
KIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSAL
MVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLI
IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKH
ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL
LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQL
PEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNH
PYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSL
MTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSA
DTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV
IQAGMFDQKSSSHERRAFLQAILEHEEQDESRQSAGSGSFPHAASSLCLGAESEEAPLKE
EDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDA
EVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRK
RKREPEGPAGTAPGGRARDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYK
DSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLC
QNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSV
KVKIRLGRKEKVPERGKGRRRGGRGGRPKPLLSDDESEDEQEEDRSGSGTEDD
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggccaccccggagccccccctgggcgggaccccccggcccggcccctctcccgggccc
ggcccctcgcccggctccatgctgggcccctcgcccggcccctcgcccggctccggccac
tccggccactccggccacgcgctgcccgccccggggtacgccccggacagcatccacccc
ctgcacaagcccctggaggcgatgcatgagaagggaatgtcggaggatccgcgctacggg
cagatgaaggggatgggaatgcgcccgggggggcacgcgggaatggggcccccccccagc
cccatggatcagcattcccaaggttacccgtcccctctggggggctccgagcacgcctcc
agcccggtgccgtccaacggcccctcgggcggctcggccggcggctccggcgcggcgctg
gacggctccggctccgactcgccggcgctgggccggggcccgtcgcccttcaacgccgcg
cagctgcaccagctgcgcgcccagatcatggcctacaagctgctggcgcgggggcagccg
ctgcccgagcacctgcaggtggccgtgcagggcaagcggccgctgccggggatgcagccg
cagatccccactctacctccgcccgccggcgccgcgcagggcccggggccagcgcccgga
gcggggccggcaccgcccggctactccagacctcatggaataggagggcccaacatgccc
cctcccggaccctcaggagttccccccggcatgccgggacagccccctgggggccccccc
aagccctggccagaagggccgctgtcggcggcggctccgggcggggccccccagaagctg
ctgccgcccccccccgccggccgcccctcccccgtgcccccggccgtgcccccggcgtcc
cccgggccccccccgccctcgccggggcagccggcgccgccggcgctgccgatccacccc
aagcagaaccggatcacgcccatccagaaaccgcgcgggctcgaccccgtggagatcctg
caggagcgcgagtacaggctccaagcccgcatcgcccaccgcatccaagagctggagaac
ctgcccggctcgctggccggggacctgcggaccaaagccaccatcgagctcaaggctctg
cgcctgctcaacttccagcgccagctgcggcaggaggtggtggtgtgcatgcgccgggac
acggcgctggagacggcgctcaacgccaaggcctacaagcgcagcaagcggcagtcgctg
cgcgaggcccggatcacggagaagctggagaagcagcagaagatcgagcaggagaggaag
cgccggcagaagcaccaggaatacctcaacagcatcctgcagcacgccaaggacttcaag
gagtaccaccgcagcgtcagcgggaagatccagaagctgaccaaggccgtggccacctac
cacgccaacaccgagcgcgagcagaagaaggagaacgagcgcatcgagaaggagcggatg
cgccggctgatggccgaggatgaggagggctaccgcaagctcatcgaccagaagaaggac
aagcgcctggcctacctgctgcagcagaccgacgagtacgtggccaacctcaccgagctg
gtcaggcagcacaaggcggcccaggtggccaaggagaagaagaagaagaagaagaagaag
aaggcagagaacgccgagggacaggccccggccatcggccccgacggggagcccctggac
gagaccagccagatgagcgacctcccggtgaaggtgatccacgtggagagcgggaagatc
ctgacgggcaccgacgcgcccaaggccgggcagctggaggcctggctggagatgaacccg
gggtacgaggtggctccacgctccgacagcgaggagagcggctccgaggaggaggaggag
gaggaggaagaggagcagccccaaccagcccaaccagcgctgcccgtggaggagaagaag
aaaattccagatccagacagcgacgacgtctcagaagtggacgcccggcacatcatcgag
aacgccaagcaggacgtggacgatgagtacggggtgtcgcaggcgctggcgcggggcctc
cagtcctactacgccgtggcccacgccgtgaccgagcgcgtggacaagcagtcggccctg
atggtcaacggcgtcctcaagcagtaccagatcaaaggcttggagtggttggtgtccctc
tacaacaacaacctcaacggcatcctggccgacgagatggggctggggaagaccatccag
accatcgccctcatcacgtacctcatggagcacaagaggatcaacggccccttcctcatc
atcgtcccgctctcgactttgtccaactgggcctacgagtttgacaaatgggctccttcc
gtggtcaaggtgtcctacaagggctctccggcggcgcggcgcgccttcgtcccgcagctc
cggagcgggaaattcaacgtcctcctcaccacctacgagtacatcatcaaggacaagcac
atcctggccaagatccgctggaagtacatgatcgtggacgagggccaccgcatgaagaac
caccactgcaagctgacccaggtgctcaacacccactacgtggccccgcggcggctgctg
ctcaccgggacgcccctccagaacaaactcccggagctctgggccctcctcaacttcctg
ctccccaccatcttcaagagctgcagcaccttcgagcagtggttcaacgcgcccttcgcc
atgaccggggagaaggtggacctgaacgaggaggagaccatcctcatcatccgccgcctg
cacaaggtgctccggcccttcctgctccggcgcctcaagaaggaggtggaagctcagctg
ccagaaaaggtggagtacgtcatcaagtgcgacatgtcggcgctgcagcgcgtcctctac
cggcacatgcaggccaagggcgtcctcctcaccgacggctccgagaaggacaagaagggg
aagggtggcacgaagacgctgatgaacacgatcatgcagctgcgcaagatctgcaaccac
ccctacatgttccagcacattgaggaatccttctcggagcacttgggcttcacgggcggg
atcgtgcaggggctggatttgtaccgtgcctccgggaagttcgagcttctggaccggatc
ctgcccaaactccgggccaccaaccacaaggtgctgctcttctgccagatgacctccttg
atgaccatcatggaggattattttgcttaccgtggcttcaaatacctcaggctggacggc
accaccaaggccgaggaccggggcatgttgctgaagaccttcaacgagccaggctccgag
tatttcatcttcctgctgagcacgcgggccggcgggctcggcctcaacctgcagtcggcc
gacaccgtcatcatcttcgacagcgactggaacccccaccaggacctgcaggcccaggac
cgggcgcaccgcatcgggcagcagaacgaggtccgcgtgctgcggctctgcaccgtcaac
agcgtggaggagaagatcctggcggcggccaagtacaaactgaacgtggaccagaaagtg
atccaggccgggatgttcgaccagaaatcctccagccacgagcgccgggccttccttcag
gccatcctggagcacgaggagcaggacgagagcagacagagcgcgggcagtggcagcttc
ccccacgctgcctcctccctgtgcctgggcgctgagtcggaggaagcacctctaaaggag
gaagatgaggtccccgacgacgagaccgtgaaccagatgatcgcccggcacgaggaggag
ttcgacctcttcatgcgcatggacctggaccggcggcgcgaggaggcgcggaaccccaag
cggaagccgcggctgatggaggaggacgagctgccctcgtggatcctcaaggacgacgcc
gaggtggagcgcctcacctgcgaggaggaggaggagaagatgttcggccgcggctcccga
caccgcaaggaggtcgactacagcgactccctgaccgagaagcagtggctgaaggccatc
gaggagggcacgctggaggagatcgaggaggaggtgcggcagaagaaatcctcgcgcaag
cgcaagcgggagcccgagggccccgcggggacggcgcccggcggccgcgcccgcgacaag
gacgaggagagccgcaagcagaagaagcgcggccgccccccggccgagaaactgtcccca
aacccgccccccctcacccgaaagatgcgcaagatcgtcgacgccgtcatcaagtacaag
gacagcagcagcgggcggcagctcagcgaggttttcatccagctcccgtcccgcaaggag
ctcccggagtactacgagctcatccgcaagcccgtggacttcaaaaagatcaaggagcgg
atccggaaccacaagtaccggagcctgaacgacctggagaaggacgtgatgctgctgtgc
cagaacgcgcagaccttcaacctggagggctccctgatctacgaggactccatcgtgctc
cagtccgtgttcaccagtgtccggcagaaggtggagaaggaggaggagagcgacggagag
gagagcgaggaggaggaggagggagaggaggaaggatccgagtccgaggcccgctcggtg
aaggtgaagatccgcctgggccgcaaggagaaggttccggaacgcgggaagggccggcgc
cggggggggcggggggggcgccccaaacccctcctgagcgacgacgagagcgaggacgag
caggaggaggatcgctccggcagcggcactgaggacgactga
DBGET
integrated database retrieval system
