Taeniopygia guttata (zebra finch): 115493155
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Entry
115493155 CDS
T01082
Symbol
SUPT5H
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115493155 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
115493155 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
tgu03019
]
115493155 (SUPT5H)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115493155 (SUPT5H)
RNA polymerase I system
115493155 (SUPT5H)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
115493155 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF150_C
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
115493155
NCBI-ProteinID:
XP_032601971
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MSDSEDSNFSEEESERSSDEGDDNEAEEQRGGGSGKEEAEEEEEEEEEEEEEEEYDEEEE
EEEDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDED
RSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPN
LWTVKCKIGEERATAIALMRKFIAYQYTETPLQIKSVVAPEHVRGYLYVEAYKQTHVKQA
IEGVGNLRLGYWNQQMVPIKEMTDVLKVVKEVTNLKPKAWVRLKRGIYKDDIAQVDYVEP
SQNQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDF
LIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREH
NFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFRMGDHV
KVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGE
LVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVSRKKDNRFAVALDSEQNNIHVKD
IVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFA
VCGFTPMSPRISSPMHPSGAGQRGGFGAGGLSRGRGRRDNDLIGQTVRISQGPYKVGYIG
VVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGLTSAYGRTPMYGSQTPMYGSGS
RTPMYGSQTPLHDGSRTPHYGSQDPPARREQDPAQSGAWDPNNPNTPSRADEDFEYGFED
EPTPSPKXYGGTPNPQTPGYPDPASPQVSQPYNPQTPGTPACEYNTEQFSPYAVPSPQGS
YQPSPSPQSYHQVAPSPVGCPNTHSPASYHPTPSPMPTRPAPAPARWGYSPMTPGAPSPG
GYNPHTPGSGIEAQRATGVTTDIQVKVRDSYLDSAAVGQTGVIRSVTGGMCSVYLKDSEK
WSAXSSEHLEPVTPTKSNKVKVILGEDREATGILLSIDGETAIVRMDLEEQLKILNLRFL
GKLLEA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttctcggaggaggagagcgagcgcagcagcgacgag
ggcgacgacaacgaggccgaggagcagcgcggggggggcagcgggaaggaggaggcggag
gaggaggaggaggaggaggaggaagaggaggaggaggaggagtacgatgaggaggaggag
gaggaggaagatgacgaccggccggccaagaagccacggcacggggggttcatcctggac
gaggccgatgtggacgatgagtacgaggatgaagatcagtgggaggacggggctgaggac
atcctggagaaagaggagatcgaagcctccaacattgacaacgtggtgctggacgaggat
cgctcgggggcgcggcgcctgcagaacctctggagggaccagcgggaggaggagctgggc
gagtactacatgaagaaatacgccaaatcctcggtgggggagacagtttacggcggctct
gatgagctctcggacgacatcacccagcagcagctgctgcccggcgtcaaggaccccaac
ctctggacggtgaagtgcaagatcggcgaggagcgcgccacagccatcgccctcatgcgc
aagttcatcgcctaccagtacacggagacgccgctgcagatcaagtcggtggtggccccc
gagcacgtgcgggggtacctgtacgtggaggcctacaagcagacgcacgtcaagcaggcc
atcgagggcgtgggcaacctgcggctgggctactggaaccagcagatggtgcccatcaag
gagatgaccgacgtgctcaaggtggtcaaggaggtcaccaaccttaagcccaaggcctgg
gtgcgcctcaagaggggcatctacaaggacgacatcgcccaggtggattacgtggagccc
agccagaaccagatctccctgaagatgatccccaggatcgacttcgaccggatcaaagcc
cggatgagcctgaaggactggttcgccaaacgcaagaagttcaagcggccgccacagcgc
ctcttcgacgctgagaagatccgctccctgggcggggacgtggcctcggacggcgacttc
ctcatcttcgagggcaaccgctacagccgcaagggcttcttgttcaagagcttcgccatg
tcggccgtgatcactgagggtgtcaagcccaccttatccgagctggagaaattcgaggac
caacccgagggcatcgacctggaggtggtgaccgagagcacagggaaggagcgggagcac
aacttccagccgggcgacaacgtggaggtgtgcgagggcgagctgatcaacctgcagggc
aaaatcctcagcgtggacggcaacaagatcaccatcatgcccaagcacgaggacctcaag
gatatgctggagttcccggcgcaggagctgaggaaatacttcaggatgggcgaccacgtg
aaggtgatcgccgggcgcttcgagggcgacacggggctcatcgtcagggtggaggagaat
ttcgtcatcctgttctcggacctgaccatgcacgagctgaaggtgctgccccgggatctg
cagctctgctccgagacggcctcgggggtggacgtggggggccagcacgagtggggggag
ctggtgcagctggacccccagaccgtgggggtcatcgtgcggctggagcgggaaaccttc
caggtgctgaacatgtacgggaaggtggtgacggtgcggcaccaggccgtgtcccgcaag
aaggataatcgcttcgccgtggcgctggactcggagcagaacaacatccacgtcaaggac
atcgtcaaagtcatcgatggcccccactccggccgcgagggcgagatccgccacctgttc
cgcggcttcgccttcctgcactgcaagaagctggtggagaacggcggcatgttcgtctgc
aagacgcggcacctggtgctggcggggggctccaagccccgcgacgtcaccaacttcgcc
gtctgcggcttcacgccgatgtcgccgcgcatcagcagccccatgcaccccagcggggcc
ggccagcgcggcggcttcggggccggggggctgagccggggccgcggccggcgcgacaac
gacctgatcgggcagacggtgcgcatctcccaggggccctacaaggtgggctacatcggg
gtggtgaaggacgccacggagtcgacggcgcgcgtggagctgcactcgacgtgccagacc
atctccgtggacaggcagcggctgaccaccgtggggtcccggcggcccgggggtctgacc
tcagcctacgggaggacccccatgtacggctcgcagacccccatgtacggctcggggtcc
cgcacgcccatgtacggctcgcagaccccgctgcacgacggaagccgcacgccccactac
ggctcccaggacccccctgcacgacgggagcaggacccggcccagagcggggcctgggac
ccaaacaaccccaacacgccctccagggcggacgaggacttcgagtacggctttgaggac
gagcccacgccgtcacccaagngctatgggggcaccccgaacccccagacccccgggtac
cccgaccccgcctcgccccaagtcagccagccctacaacccccagacccccggcacgccc
gcatgtgagtacaacacggagcagttctcgccctacgccgtcccctccccccagggctcc
taccagcccagcccgtccccccagagctaccatcaggtggccccgagcccggtgggctgc
ccgaacacgcattcgccggccagctaccaccccacgccgtcccccatgcctaccaggcca
gccccagccccagcccggtggggctacagcccgatgacccccggggcgccgtcgccgggg
gggtacaacccccacacgccgggctcaggcatcgaggcccagcgggcgactggggtgacc
accgacatccaggtgaaggtgcgggactcgtacctggacagcgccgccgtggggcagacg
ggcgtcatccgcagcgtcacgggcgggatgtgctcggtgtacctgaaggacagcgagaag
tggtcagcgnngtccagcgagcacctggagcccgtcacgcccaccaagagcaacaaggtg
aaggtgatcctgggcgaggatcgcgaggccaccgggatcctgctgagcatcgacggcgag
acggcaatcgtgcgcatggacctggaggagcagctcaagatcctcaacctgcgcttcctg
ggcaagctgctggaggcctga
DBGET
integrated database retrieval system
