Taeniopygia guttata (zebra finch): 116806872
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Entry
116806872 CDS
T01082
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116806872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
116806872
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
116806872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
116806872
NCBI-ProteinID:
XP_032600564
LinkDB
All DBs
Position
W:complement(1010948..1173871)
Genome browser
AA seq
2771 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LISQLIHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PPSPAGYMPYSHPPSYTPHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNS
RHGSNEDYLQMVHRISSDDGDPSVRNAASFSLRSPQSVCSPSGSDGTLKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGAIPFKVQYPGQTSKTPVTPQDVNHPLNTAQCL
LQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPQEVGGATVGNRAASQETGSAGNEARPA
LMVSIDLQQAGRADSQATVTQDLDIIKKHEEIKQYNDVFVCVPQEDTVGVLKFKPENHPE
IFRKMSDFGAQKTDIQQNENRQIEFQQNVSKQLESKQNEKKQVEAKRESKHESRQTEVKQ
NENRQTESKQNQSRQMEMKQNDGKQNNGKEEIRQRPETPKQKNEDRPEIPKHRHDNRRDS
SKPVSDKKIEISRHKIDVKSDPSRTKSESRSDPAKLRPDGRSVSDTPRRDHDSLKQKSED
RGESERYRGDPSKIRRPEYLRSSNKNEHDSKHGIKSDSSKPEKFTRKHRHESGESKERFS
SGDQKSRPDSPRIKQEGRGDSNKSRPDKPGFKSQNSKDEQRTDGNKSKVNSNKAQADSKA
EFPSYLLGARSGTLKHFVIPKIKRDKDVSVTQESRKTEFKGEQDKVEKIGLVEDLNKGAK
PIVVLQKLSLDDVQKFIKDREDKSRGSCFKPSKNKSSKSNKGSIDESVLKELPPDLLAEI
ESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDEAWEYEE
HDRRSSGDHKRSGYCHEGRRTSGSGRYRNRSPNDSEMDDYSPLPSLSEVARKIKKKEKQK
KRKAYEPKLTPEEMMDSSTFKRFAASIENILENLEDMDFTAFGDDDEIPQELLLGKHQLS
ELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLFNHNNDTEDEERLWRDL
IMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRVD
PHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQISSMGI
TPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSD
TDGEPMYIQMVTALVLQLIQCVVHLPSTEKDSNSEEESNKKVDQDVLMTNSYETAMRTAQ
NFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNK
STEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQVSGGEDEIQQLQKALLDYL
DENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETTGQIMHR
AESRKAFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILR
VLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFV
LCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDE
EGIKKLVNETFQKLWFTPTLHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSE
EDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFSKIRPQL
MVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIK
YGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKSQHQEDPNSTILTANKPA
LLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFA
FIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVA
KQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQC
VPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCPQDPV
RGFRHDESSNALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIADNLACFP
YQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPSSDEETESDSNSGSESK
SEEEASKPRRLRKRVNSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLLLMLKQH
LKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVYFHPKQTLDFLRSDMANSKITEEVKR
SIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAETEDDESD
GEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARVVQKTSN
GFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNKVVQNLR
SLYAAKDGTSS
NT seq
8316 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttaca
gaccttttgaaccagctgcctcttccatcacctttacctgctaccacaacaaaaagcctg
cttttcaatggacggatagctgaagaggtgaactgccttttggcttgcagggatgaaaac
ttgatttcacagctcatccacagtctcaatcaggtgtcaacagatcacatagaattgaaa
gataaccttggcagtgatgatccagagggagatataccagtcttgctgcaggctgtcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatatggggtgcaaagc
gggatgatgatgtcgcagtttaatatttctcagaactccatgagaggtagtcctgcatct
tctaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacaa
acaagctctggtaacagatttttggcacaacagaacagtccagtgcctagtccatatgct
cctccaagtcctgcaggatacatgccatattcacatcctccaagttatacaccacatcct
cagatgcagcaagcttcagtatccagtcccattgtcacagctgggatgagaaatctccat
gaaaataaagtttcaagtcaattgtctggaaattcagctaatcatcatgctgataattct
agacatggctcaaatgaagactatctacagatggtgcacaggataagtagtgatgatggc
gatccttcagtaaggaatgctgcatctttttccttgaggtcaccacagtcagtctgctct
ccatctggaagtgatggaacccttaaaggatcaagacaacctttaatccaacaatctcaa
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagctctccttccaaggactccactaagcttacatta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtgtcagagggtgctattccttttaaggtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccacccattaaacactgctcagtgtttg
ctgcagcatgaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacagcctcaaactcctgtggtacagacacagcagcaggtttcg
caacaaggagctataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtacaagataaa
gataagcctctgaagaagcgaaaacaggaaaacaaaccacaggaggttggaggtgctact
gtaggaaatagagcagcttctcaggagacaggttctgcaggaaatgaggcaaggccagca
ctgatggttagtattgatctgcagcaagcaggaagagcagactctcaggcaacagtaact
caagatctggacatcatcaaaaaacatgaagaaattaagcagtataatgatgtgtttgtg
tgtgttccccaagaagacacagttggagttcttaaatttaaacctgaaaaccaccctgag
atttttaggaaaatgtcagactttggggctcaaaagacagatatccagcaaaatgaaaac
agacaaattgaatttcagcaaaatgtgagcaagcagttggaaagtaagcaaaatgagaag
aaacaggtagaagctaaacgtgaaagcaagcatgaaagcagacaaacggaagtgaaacaa
aatgagaacagacaaacagaatcaaaacaaaaccagagcaggcaaatggagatgaaacaa
aatgatggaaaacaaaataatggcaaagaggaaataaggcagaggcctgaaacaccgaaa
cagaagaatgaagacaggcctgaaattccaaaacatagacatgataacagaagggactca
agtaaaccagtatcagataagaaaatagaaatatctaggcataaaatagatgtgaaatct
gatccttcaaggacaaagtctgaaagtagatccgatccagcaaaactgaggcctgatggg
cgctcagtttctgatacaccaaggcgtgaccatgatagcctcaaacaaaaatcagaggac
aggggggagtcagagagatacagaggagatccatccaagatcagaagacctgaatatttg
agatcctcaaacaaaaatgaacatgattctaaacatggtattaaatctgatagttcaaaa
cctgagaaatttacaaggaaacatagacatgagtctggtgaatcaaaggaaaggttttct
tctggggatcagaaatcaagacctgacagccctcgcattaaacaggaaggtagaggagat
tctaataaatcaagacctgataaacctggctttaaatcacaaaacagcaaggatgaacaa
aggacagatggtaacaagagtaaagtaaatagtaataaagcacaggctgacagtaaagca
gagtttcccagttatttgttgggggcaagatctggcacattgaaacattttgtcattcca
aaaatcaagcgtgataaagatgtcagtgtcactcaggaatcaaggaaaactgaatttaaa
ggtgaacaggacaaagtagagaagattgggctagttgaagatctaaataaaggagctaag
cctatagttgtccttcaaaaactttcactggatgatgtgcagaaatttattaaggataga
gaagataaatcaaggggctcttgttttaaacctagcaagaacaagtcatccaaatctaat
aaaggtagcatagatgagtcagtgttaaaggaattgcctcctgatctcctggcagaaatt
gaatccaccatgccactttgtgaacgtgtgaaaatgaacaagcgcaaacgtagcacggtt
aatgagaaaccaaaatatgctgaaatcagttctgatgaagacaatgacagtgaagaagct
tttgaatcctctcgtaaaagacataaaaaggatagagatgaagcttgggagtatgaagaa
catgatagaagaagttctggtgaccataagagaagtggctattgtcatgaaggaaggagg
acttctggtagtggccgttatcgtaatcgcagtcccaatgactctgaaatggatgattat
tctcctcttcctagcctcagtgaggtagctagaaaaattaagaaaaaagaaaaacaaaag
aagaggaaagcttatgaacctaaattaacacctgaagaaatgatggattcttctactttc
aaaagatttgctgcttcaatagagaatattttggaaaatttagaagacatggattttaca
gcttttggtgatgatgatgagattccacaagaactgctactgggaaagcatcagcttagt
gagttggggagtgaatctgcaaaaatcaaggcaatgggcattatggacaagctctcaaca
gataaaacagtaaaagtcttgaatattttggagaagaatattcaagatggatcaaagctt
tccacattatttaaccataacaatgacactgaagatgaggagagattatggagagatctt
attatggagagagtgacaaaatctgctgatgcttgtcttactgctatcaatattatgaca
tcaccaaatatgccaaaagctgtatatattgaagatgtaatagaaagagttattcaatac
acaaaatttcatttgcagaacactctctatcctcagtatgatcctgtgtatagagtggat
cctcatggtggtggtgttttaagttcaaaagcaaaacgtgccaagtgttccacccacaag
caaagagttatagtgatgttatataacaaagtttgtgacattgtcagcagtttgtcagag
ttgctagagatacagcttctcactgatacaactattcttcagatatcatctatgggaata
acacctttctttgtagaaaatgtcagtgaactacagctatgtgccatcaaattagtgact
gcagtgttctccaggtatgaaaaacatagacagctaatactagaagaaattttcacttca
ctcgcaagactaccaaccagcaagaggagtttgagaaatttcagattaaacagcagtgac
actgatggagagcctatgtatattcagatggtaacagcactagttctgcagcttattcag
tgtgtggtgcatttgccatcaacagaaaaagattccaattcagaggaggaatcaaacaaa
aaagtggatcaagatgtgcttatgactaactcatatgaaacagccatgagaacagcacaa
aacttcctttctattttccttaagaagtgtggcagtaaacaaggggaagaagattacaga
ccactgtttgagaactttattcaagatcttctttccacagtcaataaaccagaatggcca
gctgcagagttgctacttagcttattaggaaggctattggttcaccagttcagtaacaaa
tctacagaaatggcattaagagttgcatcgcttgactatcttggaactgtagctgcaagg
ctcaggaaagatgcagtcactagcaaaatggatcaaggttctatagccagaatactcaaa
caggtttcaggaggagaagatgaaattcaacagctgcaaaaggctttgctagattatcta
gatgagaacacagaaactgatgcatcattagtgttttctcggaagttttatatagctcag
tggttccgtgatacaactatggagacagagaaagcaattaaatctcagaaggatgaggat
tcatctgaaggaactcatcatgcaaaagatgttgagaccacggggcagatcatgcataga
gcagaaagtcgcaaagcatttcttcgcagcatcattaaaactgctccatctcagttcagt
acattaaagatgaattccgatactgtggactatgaagatgcatgtttgattgttcgctac
ttggcctctatgaggccatttgcccagagctttgatatttatttgacacagattctgcgt
gtacttggtgaaaatgcaattgctgttcgaacaaaagccatgaagtgtctgtctgaggtt
gttgctgtagaccccagtattctagccaggctggatatgcaacgaggagttcatgggcgg
ctaatggataactccactagtgtaagagaagcagctgtggagcttcttggccgatttgtg
ctctgtcgtcctcagcttgctgagcagtattatgatatgctgattgaaagaatattggat
actggtatcagtgtcagaaaaagagtcataaagatacttagggatatctgcattgaacaa
ccaacatttcccaaaattactgagatgtgtgtaaaaatgattcggagagtcaatgatgaa
gaaggcattaagaaattagtaaatgagacattccagaaactctggttcactccaactcta
catcatgacaaagaagcaatgactaggaaaatactaaacatcactgatgtggttgcagct
tgtagagatacaggctatgattggtttgaacagcttcttcaaaatctgttgaagtcagaa
gaggatgcctcatataaacctgtgaagaaagcctgtactcaacttgttgacaatttggtt
gagcacattcttaaatatgaggaatccttgtcagattctgacaacaaaggtgtgaattct
ggtcgcttggttgcttgcataaccactttgttcttattcagcaaaatcaggcctcagcta
atggtcaaacatgccatgaccatgcagccatacctgaccactaaatgtagtacccagaat
gatttcatggtgatctgcaatgttgcaaaaatcttagaacttgtagtgccactaatggaa
cacccaagtgagacatttcttgccactattgaggaagacctcatgaaactcatcatcaaa
tatggcatgacagttgttcagcattgtgtgagctgtcttggggctgttgtgaacaaggtc
actcagaactataaatttgtgtgggcctgttttaatagatactatggtgcactttcaaaa
ttaaaaagtcaacaccaagaagatcccaacagtacaatacttactgccaataaaccagca
ctccttagatcacttttcactgttggagcactgtgtcgacattttgattttgatcaagaa
gattttaagggcaacagtaaggttaacattaaggataaagtacttgaactgctgatgtat
tttacaaagcattcagatgaagaagtacagacaaaagccattattggccttggttttgca
tttatacaacacccaagtttaatgtttgaacaggaagtgaagaccctgtacaacagcatt
ctttcagacaagaactgttcggtaaacttaaaaatccaggtgttaaaaaacctccagacc
tacttgcaggaggaggatacacgtatgcagcaggcagacagagactggaaaaaagtagca
aagcaggaagatctgaaagaaatgggtgatatttcctcagggatgagtagttccatcatg
cagctgtatctcaaacaggtccttgaggctttctttcatacccagtccagtgtacgccac
tttgctctaaatgtcattgcactgacattaaaccagggtctcatccatcctgttcagtgt
gtgccgtacttaattgctatgggcacagatccagagccctctatgcgaaacaaagctgac
cagcaattggtggaaatagacaaaaagtatgctggattcattcatatgaaagcagtggct
ggtatgaagatgtcttaccaggtacaacaggcaatcaatacctgcccacaggatcctgtg
agaggttttagacatgatgaatcatccaatgcattgtgttcacacctatactccatgatt
cgagggaaccgtcaacatagacgagcatttcttatttccttactcaacctctttgatgat
actgcaaaaacagaggtgaatatgctcttgtacatagcagacaatctagcctgttttcct
tatcaaacacaggaagagccactgtttataatgcatcatatagacattacattatccgtt
tctggtagcaacctactacagtcatttaaagagtctatggtgaaagacaaaaaaaaggaa
agaaagccttcatcagacgaggagactgagagtgacagtaacagtggtagtgagagcaaa
agtgaggaggaagcttctaagcctcggaggttacggaaacgagtaaactctgattcagat
tctgatgaagaaaatgatataaatgccgtgatgaaatgtttaccagaaaattcagctcct
ttaattgaatttgcaaatgtctcccaaggcatattattacttttgatgctgaaacagcat
ttaaagaacctctgtggattctctgatagtaaaattcagaaatattctccatctgaatct
gcaaaagtgtatgataaggctataaacaggaagacaggagtatatttccatccaaaacaa
actctggattttctgcggagtgatatggctaattctaagatcactgaagaagtgaagagg
agtatagtaaaacagtacttagatttcaagctccttatggaacatttggatcctgatgaa
gaggaagaagatggagaggtgtcagctagcacaaatgctcggaacaaagcaattacctcg
cttcttggaggaggcagccctaaaaacaatgcagctgagacagaggatgatgaaagtgat
ggggaggatagaggaggaggcacttcagggtcattgagaaggtcaaaacgaaattcagac
tctacagagttggcagcacagatgaatgaaagtgttgatgtcatggatgtcatcgctatt
tgctgtccaaagtacaaagaccgaccacaaattgcaagagtagtacagaaaaccagcaat
ggcttcagtgttcagtggatggcaggctcctacagtggctcctggactgaggctaagcgc
cgtgatggccgcaaactggtgccttgggtagacactattaaagagtcagacattatttac
aaaaaaattgctctaacgagtgctaataagctgactaataaagttgttcaaaatttacga
tcgctgtatgctgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system