Thauera sp. GDN1: CKCBHOJB_00101
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Entry
CKCBHOJB_00101 CDS
T09925
Symbol
ligA_1
Name
(GenBank) DNA ligase
KO
K26441
DNA ligase [EC:
6.5.1.1
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CKCBHOJB_00101 (ligA_1)
Enzymes [BR:
thag01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CKCBHOJB_00101 (ligA_1)
BRITE hierarchy
Motif
Pfam:
DNA_ligase_OB_2
DNA_ligase_A_M
Ploopntkinase3
Motif
Other DBs
NCBI-ProteinID:
WEN40574
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All DBs
Position
complement(117091..118041)
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AA seq
316 aa
AA seq
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MPSPPPRRSRDASSPYQRPVPVAESPSRPEARRFGRTLALCATALALCLATPASHATADT
PAPAMLAERYTDAIDPAAYWVSEKLDGVRALWDGQRLRFRSGREIVAPAWFLAALPATAV
DGELWIGRRRFDELSGLIRREDPQDPAWREVRYMLFDQPGATGDFSARLHTLRAIVTAAA
VPWLQTIPQRRVPDRAALQRLLDEIVAGGGEGLMLHRADARWQPGRSAALLKLTPWQDAE
ARVVGYAPGKGRLQGKVGSLLVEADDGRRFRIGSGLSDAIRAAPPPIGALVTYRYRELTP
AGMPRFPRYLRERTLP
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcctccgccccgccgctcgcgggacgcttcatcgccgtaccaacgccccgtc
cccgtggcggaatcgccatcgcgcccggaggcccgccgcttcggccggacgctggcgctg
tgcgcgaccgcgctcgcgctttgcctcgccacgccggcaagccacgcgaccgcggacacc
ccggcgccggcgatgctcgccgaacgctacacggacgccatcgatcctgccgcctactgg
gtcagcgagaagctcgacggcgtgcgtgcgctgtgggacggccagcggctgcgctttcgc
agcgggcgcgagatcgtcgccccggcatggttcctggcggcgctgccggccacggcggtg
gacggcgagctgtggatcgggcgacgacgcttcgacgaactgtccggcctgatccgccgc
gaggacccgcaggaccccgcgtggcgcgaggtgcgctacatgctcttcgaccagcccggc
gccaccggcgacttcagcgcccgcctgcacacgctgcgcgccatcgtcaccgccgccgcc
gtgccctggctgcagacgattccgcagcggcgcgtccccgaccgcgccgccctgcagcgc
ctgctcgacgaaatcgtcgccggcggcggcgagggcctgatgctgcaccgcgccgacgcc
cgctggcagcccgggcgcagcgcggcgctgctcaagctcaccccctggcaggacgccgag
gcgcgcgtggtcggctacgcccccggcaagggccggctgcagggcaaggtcggttccctg
ttggtggaggcggacgacggccggcgcttccgcatcggcagcggcctcagcgacgctatt
cgcgccgcaccgccgccgatcggcgcgctcgtcacctaccgctaccgcgagctcactccc
gccggcatgccacgttttccgcgctacctgcgcgagcgcacgctgccttga
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