Thermobifida halotolerans: NI17_001000
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Entry
NI17_001000 CDS
T08032
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
thao
Thermobifida halotolerans
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thao03016
]
NI17_001000 (truB)
Enzymes [BR:
thao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NI17_001000 (truB)
Transfer RNA biogenesis [BR:
thao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NI17_001000 (truB)
Prokaryotic type
NI17_001000 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
MDMPI_N
DKCLD
PseudoU_synth_2
Saf-Nte_pilin
Motif
Other DBs
NCBI-ProteinID:
UOE19875
UniProt:
A0A399G3I5
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All DBs
Position
233763..234644
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AA seq
293 aa
AA seq
DB search
MTDGVVIVDKPADWTSHDVVARVRRLAKTRRVGHAGTLDPMATGVLVLGVGRATRLLGHL
ALTEKVYTATIRLGQTTTTDDAEGEPLERRGADQVDEAAVHAGTKALTGVIRQVPPQVSA
IKVNGQRAYRKARAGEAVDLKAREVTVHEFAVTGLRRIPDPDGGFVDVDARVTCSSGTYI
RSLARDLGADLGVGGHLTALRRTRVGPYGLDRAATLDELAAEFTLMPLADAVAAAFPVRR
LTEAEARRVAHGNRISPSGSPGPVGLFAPDGSVLALAEDRPGYGKPIVVFAGN
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggcgtcgtcatcgtcgacaaaccggccgactggacctcccacgacgtggtc
gcccgggtgcgccgcctggccaagacccgcagggtcggccacgcgggcaccctcgacccg
atggccaccggggtgctggtgctgggcgtcggcagggccaccagactgctggggcacctc
gccctcaccgagaaggtctacacggcgacgatccggctgggacagaccaccaccaccgac
gacgccgagggagagccgctggagcgccgcggcgccgaccaggtcgacgaggcggcggtc
cacgccgggaccaaagcgctcaccggcgtgatccggcaggttccaccgcaggtcagcgcg
atcaaggtgaacggtcagcgcgcctaccggaaggcccgcgcgggggaggcggtcgatctc
aaggcgcgcgaggtgacggtccacgagttcgccgtcaccgggcttcgccgcatccccgac
cccgacggcggcttcgtcgacgtcgacgcccgggtcacctgctccagcggcacctacatc
cgttccctggcccgcgacctcggcgcggatctcggtgtgggcgggcacctcacggcgctg
cgccgcacccgggtcggcccctacggactggaccgggccgcgaccctggacgagctggcc
gccgagttcaccctgatgccgctggcggacgcggtcgccgcagccttcccggtccgccgc
ctcaccgaggcggaggcccgcagggtggcccacggcaaccggatctccccgagcggaagc
cccggaccggtcggcctgttcgccccggacggcagcgtgctggccctggccgaggaccgt
cccggctacggcaaacccatcgtggtcttcgccgggaactga
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