Pukyongiella litopenaei: C6Y53_09350
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Entry
C6Y53_09350 CDS
T05357
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
thas
Pukyongiella litopenaei
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thas03016
]
C6Y53_09350
Enzymes [BR:
thas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C6Y53_09350
Transfer RNA biogenesis [BR:
thas03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C6Y53_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AVO37887
UniProt:
A0A2S0MPW8
LinkDB
All DBs
Position
1887384..1887998
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AA seq
204 aa
AA seq
DB search
MANHLYQRDLPDGLDLGPVVAIDCETMGLNPHRDRLCVVQMSGGDGNAHIVQVHKGQTEA
PNLSAMLENPDVLKLFHFGRFDIAAMYHAFGALAAPVYCTKIASRLVRTYTDRHGLKNLC
QELLGVDISKQQQMSDWGASNLTGAQLEYAASDVLYLHQLRERLDERMAREGRAELAASC
FDFLPTRARLDLAGWPEIDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtggccaatcatctctatcagcgcgacctgccggacgggctggacctgggcccggtcgtg
gccatcgattgcgaaaccatggggctgaacccgcatcgcgaccggctgtgcgtggtgcag
atgtcgggcggtgacggcaatgcccatatcgtgcaggtgcacaaggggcagaccgaggcc
cccaacctgtccgccatgctggaaaaccccgatgtcctgaaactgttccatttcgggcgg
ttcgacatcgccgcgatgtatcatgcgttcggcgcgctggccgcgccggtctattgcacc
aagatcgccagccgcctggtccgcacctataccgaccggcacgggctgaagaacctgtgc
caggaattgctgggggtcgatatttccaagcaacagcagatgagcgactggggtgcgtcg
aatctgaccggggcgcagctcgaatatgccgcctcggacgtgctttacctgcaccaactg
cgcgaaaggctcgacgaacggatggcgcgcgagggccgcgccgaactggccgcgtcctgt
ttcgatttcctgccgacccgcgcccggctggaccttgccggctggcccgaaatcgacatc
tttgcgcattcatga
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