Infirmifilum lucidum: IG193_02990
Help
Entry
IG193_02990 CDS
T06910
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
thel
Infirmifilum lucidum
Brite
KEGG Orthology (KO) [BR:
thel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
thel02048
]
IG193_02990
Enzymes [BR:
thel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
IG193_02990
Prokaryotic defense system [BR:
thel02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
IG193_02990
Subtype I-B factors
IG193_02990
Subtype I-C factors
IG193_02990
Subtype I-D factors
IG193_02990
Type II CRISPR-Cas system
Subtype II-B factors
IG193_02990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Exo5
Motif
Other DBs
NCBI-ProteinID:
QOJ79442
UniProt:
A0A7L9FJC0
LinkDB
All DBs
Position
complement(543935..544564)
Genome browser
AA seq
209 aa
AA seq
DB search
MSLTAQDVERIVYRSLRTAYEKDRGPWTAPPDVIYVTELTGCLRRSWYIRAMGGPLPDEK
VVILLLGDDVHFLINSQFPLGEGEKSFEKEFQGVKIRGRVDRIAGETIFEFKTASSIPKE
PRDHHVDQMQLYFWLADRARGFIVYVSKTTGQVRAFPVSRDEDRIKRLLERAIRLSGSLK
QGTPPNPEKGWLCDYCEFRDSCPAIKESQ
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcacggctcaagacgtcgagaggatagtctacaggtctctccgcacggcatac
gagaaggacaggggcccgtggactgcacccccagacgtaatttatgtaactgagctcaca
ggatgccttaggaggtcttggtatattcgcgccatgggcggcccactaccagacgagaaa
gtggtcatactcctcctcggcgacgacgtccacttcctcataaacagccagttcccgctc
ggggagggcgagaagagcttcgagaaagaatttcagggcgtgaagattagggggagagtg
gacaggatagccggtgaaactatttttgaatttaaaacagcaagttcgatacccaaggag
cccagagaccaccacgtcgaccaaatgcagttatatttctggctcgcagatcgcgcaagg
ggtttcattgtctacgtctccaaaacgactgggcaagtgagagccttcccggtgtcgaga
gacgaggacaggataaagcgtctcctagagcgtgcaataaggctgagcggctctctaaaa
cagggtactccaccgaatccagagaaagggtggctctgtgactactgtgagttccgcgac
tcgtgccctgccatcaaagaaagccagtaa
DBGET
integrated database retrieval system
