Thiomicrospira sp. S5: AYJ59_07250 Help Entry AYJ59_07250       CDS       T05796                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism thio  Thiomicrospira sp. S5 Pathway thio02020   Two-component system thio02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:thio00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     AYJ59_07250  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AYJ59_07250  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:thio03021]     AYJ59_07250 Transcription machinery [BR:thio03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AYJ59_07250 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  AZR82100 UniProt:  A0A3S9TNJ4 LinkDB All DBs Position 1580030..1581517 Genome browser AA seq 495 aa AA seqDB search MALMPGLQINIGQQLKLTPQLQQSIKILQYSALEVQQTISTTLETNFMLELDEDRPEDAE EFASEEDAAEVSDASENEIDIEASDTLSDDLQIDCEWEEVYTDISPVSSSIKSDNDDYTS PENYTSSEVTLSEKLYWQSDIYSWTETQELIASYIIDDINDEGYLKTPLENILADIQEKE PDLLIHLSDIEGVLSVIQQFEPTGVGARDLSECLILQLKALHQNPYVVTAIKIIEENFDL LSVRDYKRIKKIYLLNDDELTEVIQVIQSLSPRPGREYSSTQGEIVIPDLKLYRTKDGFM VELNQDAFPRLTINSAYINMAGDLGSSSQEAKQIKEQLTEAKGLIKSIQSRGETLLRVGK YIVEKQARFFDEGEQAMQPMVLRDVAESLELHESTISRATNQKYMQTPRGTFELKYFFST GVSQYGSEDQSAIAIKSHIKQLIDDEDPNKPLSDNKLMALLEEKEINVARRTIAKYREAM HIPSSSERKKLNKFK NT seq 1488 nt NT seq  +upstreamnt  +downstreamnt atggcgttaatgccgggcttacaaatcaatatcggtcaacagctcaaactgacaccgcag ttgcaacaatccatcaaaatcctgcaatactccgcgttggaagttcagcaaaccatctcc accacgcttgaaaccaacttcatgctggaactggatgaagaccgcccggaagacgccgaa gagttcgcttcggaagaagatgccgccgaagtctcggatgccagtgaaaacgagattgac atcgaagcatccgacaccctgtccgacgatttacaaatcgactgtgaatgggaagaggtg tataccgacatctcccctgtttccagttcaatcaaatccgacaacgatgattacacctct ccggaaaactatacttcgtccgaagtgaccttgagtgaaaagctgtattggcaatcggat atttattcctggaccgaaacgcaagaactcattgcgtcttatatcattgacgacatcaac gatgaaggttacttgaaaacgccattggaaaacattctggccgatattcaggaaaaagaa cccgacctgctgattcacctgtcggacatcgaaggcgttttatcggtcatccagcagttt gagccgaccggcgtcggcgcgcgtgacttatcggaatgcttgattctgcaactgaaagcc ttgcaccagaacccatatgtcgtcactgccatcaaaatcatcgaagaaaacttcgatttg ctgagtgttcgtgactataaacgcatcaaaaagatttaccttttgaatgacgatgaactg accgaagtgattcaggtgatccaatcgctcagcccgagacccggtcgagagtattcgtcg acccagggtgaaatcgtgattccggatttaaagctgtatcgcaccaaagacggctttatg gtggaactcaatcaggatgcgttcccgcgcctgactatcaattcggcatacatcaatatg gcgggcgacttaggctccagtagccaggaagccaaacaaatcaaagaacaactgactgaa gcgaaaggtttgattaaaagcatccaaagccgaggggaaaccctgctgcgtgtcggcaaa tacattgtcgagaaacaagctcgcttcttcgatgaaggcgaacaagctatgcagccgatg gtgttgcgcgacgtggccgaatcgcttgaattgcacgaatccaccatttcccgtgccacc aaccagaaatacatgcagacgccacgcggcacctttgaactgaaatacttcttctccacc ggcgtgtcgcaatacggcagcgaggatcaatccgccatcgccatcaaatcgcacatcaag caattgattgacgatgaagatccaaacaaaccgctcagtgacaataaactcatggcgttg ctggaagaaaaagaaatcaatgttgcgcgccgcaccattgccaaatatcgcgaggcgatg cacattccatcgtccagcgagcgcaaaaaactcaataaatttaaataa

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