Thiohalocapsa sp. PB-PSB1: N838_02240
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Entry
N838_02240 CDS
T07019
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00550
Peptidoglycan biosynthesis
thip01100
Metabolic pathways
thip01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N838_02240 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N838_02240 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thip01011
]
N838_02240 (mrdA)
Enzymes [BR:
thip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
N838_02240 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
thip01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
N838_02240 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QQO52381
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All DBs
Position
complement(526617..528524)
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AA seq
635 aa
AA seq
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MIEASFKDRLGERELFARRALLAALLALLCLTLVGVRLFKLQVVEHDHFSTLSEDNRIKI
QPLPPSRGLIYDTNGLLLADNLPSYALEITPENIQNLDATIDALAQIVRISDADRERFAR
LLSRRRRFEGVPIRLDLNERERARIAVHGHRFPGVDIRAELLRYYPLGAVTAHVLGYVGR
INEQEMESIDVSDYAGTSHIGKLGVEKAHEEWLHGHVGHEQAVVNARGRVLERREEKPPV
PGRDLHLFLDAALQQDAIAALGKHRGALVAIEPETGGVLALASTPTYDPNPFVSGIGHAE
YAALRDDIDHPLYNRAVRGQYPPGSTIKPFVALAGLALGAVSTFDHKYCGGYFQLPGQSH
RYRCWRRGGHGSLALEDAIVQSCDVYFYRLANDLGIQRMTGFLQEFGFGRRSGIDIAGEL
GGLLPSPEWKQRVRHQIWYPGETLIVGIGQGSFLATPLQLAAATAAMANRGRYLKPRMVK
ATGTRVGKPLQLTEPEVHQIPVNGPRKWQDVIDAMSEVVEGSRGTARRIRNDSYRIAGKT
GTAQVFTVGQNEFYNEAEVAERMRDHALFVAFAPVEQPRIALAVIVENGGHGGSVAAPIA
RAVMDSYLLGERVQASIHPAVRGLGQAGSATNTGR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagcaagttttaaggatcgtctcggtgaacgtgaattgttcgcacgcagggcg
ctgttggctgccttgttggctctgctctgcctgacattggtcggggtgcgcttgttcaag
ttgcaggtggtcgagcacgatcatttttccacgttgtccgaggacaaccgcatcaaaatt
cagccattaccgccaagccgaggactcatctacgataccaatggcctgttgttggcggac
aacctgccgtcctatgcgttggagatcacgccggagaatatccagaacttggacgcaacc
atcgacgcgttggcgcaaatcgtccgcatcagcgatgccgaccgtgagcgcttcgcgcgc
ctgctgtccaggcgcaggcgcttcgagggcgtgccgatccggctcgatctgaacgagcgc
gagcgagcccggattgccgtgcatggccatcgttttccaggggtcgacatccgcgcggaa
ttgcttagatactacccgctgggagcagtcacagcccatgtgctgggctatgtcgggcgc
ataaacgaacaggaaatggagagcatcgatgtctctgattatgcaggcaccagccatatt
ggcaagctcggtgtcgagaaagcgcatgaggaatggctgcatggccacgtcggtcacgag
caagccgtggtcaatgcccgcgggcgtgtgctggagcggcgtgaggagaagcctccagtg
cctgggcgtgatctacacttgttcctggatgctgccttgcaacaggatgccatcgcggcg
ctcggcaaacaccgcggggctctggtggcgattgagccggagaccggtggcgtgctcgcg
ctggcaagcacaccgacctacgatcccaatccattcgtcagcgggatcggccacgccgaa
tatgcggcgttgcgcgatgacatcgaccatccgttatataaccgcgctgtgcgcggccag
tatccaccgggttccacgatcaaaccgtttgttgcccttgccggcctcgccctaggcgcg
gtcagcacatttgaccacaaatactgtggcggttacttccaactgccaggacaaagccat
cgctaccgctgctggcggcgcggcgggcatggctccctcgccttggaagatgccattgtg
caatcctgtgacgtgtatttttatcgcctcgcgaacgatcttggcattcagcggatgacc
ggctttttgcaggagtttggttttggacggcgcagcggtatcgacattgccggcgagctg
ggcggtttgctgccatcacctgagtggaagcaacgtgtgcgtcatcagatctggtatcct
ggtgaaaccctgatcgtcggcattggccaaggctcattcctggcaacgccattgcagttg
gcagcagccaccgcggccatggccaaccgtggtcgctaccttaagccgcgtatggtcaag
gcgaccggtacgcgtgtcggcaagccactccaactcaccgagcccgaggtgcatcaaata
ccggtcaatggcccgcgcaaatggcaggatgtaattgatgccatgagcgaggttgtcgag
gggagccgcggcactgcccgacgcatccgcaacgacagttaccgtatcgccggcaaaacc
ggcactgcccaggtattcacggtggggcagaacgagttctacaatgaggccgaggtcgct
gaacgaatgcgtgatcacgcgttgttcgtcgctttcgccccggtggaacagccgcgcatc
gcgctggcggtgatcgtcgaaaacggcggtcacggcggatcggtggccgcaccgatcgcg
cgcgcggtaatggacagttatttgcttggcgagcgtgtgcaggcatccatccatcccgcg
gtacgcggacttgggcaagcaggctcagcaacgaacacgggtcggtaa
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