Thiohalocapsa sp. PB-PSB1: N838_26290
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Entry
N838_26290 CDS
T07019
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thip03036
]
N838_26290 (smc)
Chromosome and associated proteins [BR:
thip03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
N838_26290 (smc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
BLOC1_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QQO56351
LinkDB
All DBs
Position
complement(6291951..6295448)
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AA seq
1165 aa
AA seq
DB search
MRLEKIKLAGFKSFVDPTTIPFPSNLAGVVGPNGCGKSNVIDAVRWVMGESSAKMLRGES
MADVIFNGSTSRKPVGTASIELTFDNSDGRAGGQFSAFNQIAVKRQVSRDGQSAYFLNGA
RCRRRDIQDLFLGTGLGPRSYAIIEQGVISRFIEARPDELRLFIEEAAGISKYKERRRET
ENRMRHTRENLERLNDLRDEVRKQLQHLERQAATAEKYRRLKTDERRLEDQLTALRWRDL
DRDLGERERVIGEHEVALEARRAEQRAVEAAIEAHRDGFADASDHFNAVQGRYYEVGAEI
ARLEQAIAFARENRSRRESELGRVRRELDEAEAHLQRDQAEYAQLSETLEQDLPQLETVT
QQLLAAGEQLADREICLDAWQARWDELQQQLSAPTEQAQAERGLINNLERRLQQEAQREA
RIQQELSRLDTTELTRRMHALEQRSDALDEQIAAVADEQTATADALRKLDEERHALSGRL
DAARTELQTCRGRQASLEALQDAALEGSDDNLAAWLERHELQDVPRLLDTIEVDAGWERA
AEAVLDDALGALCVPDLDAYASDLDCGPLMLLGTAFSGSQAVDNDSLLARVRCPWPLADL
LAGIRIAENAGEALARRAGLALGERFVTRDGSLIGRDWIQSAADGPLIVGSIRRAEELRI
LQTSGEELEQTIADLAEQQAALTERGQELEQEREDGLQFLTRLSRERATMDAELGAGRSH
LEHLQKRREELTKEHTELAEDRTEILDEIEEARERLHQTLEQTEELTARRDDLSSQRDRL
RAEVNAARAEEGRLRDERQRLTLGVETRRASRNAIEAAVERARQQIGSLAEHRDELLSAM
QQDAEPLVEQGEQLQEQLALRITVETELVDARNRMQELDQTLRESEQQRHRLEQAVADAQ
RILDGKRLERQEQLVRRQTLEEQLAGRDCTAPAILQGMDALASAEVWQAELSQVRSHIQR
LGNINLAAIDEFNEQSERMRYLEQQHDDISASLETLEAAIRKIDRETRNRFKETFDRVNQ
GLQQLFPRVFGGGHAYLELTGDDLLETGVTIMARPPGKRNSSIHLLSGGEKALTAVALVF
AIFQLNPAPFCMLDEVDAPLDDANVGRFCELVRSMSDQVQFIFITHNKVTMEIADHLIGV
TMHEPGCSRLVSVDLDAAASLVAAS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgaaaaaatcaaactcgccgggttcaaatcctttgtggacccaaccacgata
ccgtttccaagcaatctggccggcgtcgtcgggccgaatggctgtggtaagtccaacgtt
attgacgcggtacgttgggtcatgggcgagagttctgccaagatgctgcgcggcgagtcg
atggccgatgtcatcttcaacggcagcactagccgcaagccagtcggtacggccagcatc
gagttgactttcgacaacagcgacggacgtgccggcggccaattctcggcattcaatcaa
attgcagtcaagcgccaggtttcgcgtgacggacagtctgcctattttctcaacggtgca
cgttgtcgccggcgcgatatccaggatttgttcctcggcactgggctcggtccacgcagc
tacgccatcatcgaacagggtgtgatctctcgcttcattgaggcaaggcctgatgaactg
cgactcttcatcgaagaagcagccggcatctcaaaatacaaggagcgacgccgcgagaca
gaaaaccgcatgcgccacacgcgcgagaatcttgaacggttgaatgatctgcgcgacgag
gttagaaaacaacttcagcacctggaacgccaagcagccacggctgagaaatatcgacgc
ttgaaaaccgatgagcggcgtttggaagatcagctcacggccctgcgctggcgcgatctg
gaccgcgatctcggcgaacgtgagcgagtgatcggcgagcacgaggtggcattggaagcg
cgccgcgccgagcaacgagctgtcgaggccgcaatcgaggcgcaccgtgatggcttcgcc
gatgcctcggatcacttcaacgcagttcagggtcgctactatgaggtaggggctgaaatc
gcccgcctggagcaagccattgcgtttgccagagaaaaccgctcgcgtcgtgaaagcgaa
ctcgggcgtgtgcgccgcgagctggatgaagccgaagcgcatttgcaacgcgaccaggcg
gaatatgcgcagttgtccgagacattggaacaggatttgcctcagctggagacggtaacg
caacagctcctggctgctggcgagcagttggccgaccgtgaaatctgccttgatgcttgg
caggcaaggtgggacgagctgcaacaacagctctccgctcctactgagcaggcgcaagcc
gaacgcgggctgatcaataacctggagcggcgcctgcaacaggaggctcagcgcgaggca
cgtatacaacaggagctgtcgcgcctggataccacggagcttacacggcggatgcatgcc
ctcgagcaacgctccgacgcacttgatgagcagattgccgctgtcgccgatgagcagacc
gccactgccgatgccctgcgcaagcttgatgaagaacgccatgcactgtccggacggctg
gatgcagcgcgcaccgaactacagacctgccgcgggcggcaagcttcgcttgaagcactt
caggatgcggcgctggaaggcagtgacgacaacctggccgcctggctagaaaggcatgaa
ctgcaggacgtgccacgcctgctcgacacgatagaggtggatgcaggatgggagcgtgcg
gctgaggcagtgctcgatgatgcacttggagccctttgcgtaccggacctggatgcctac
gcatccgatctcgattgcggccctctgatgctgctcggaactgcattcagcgggtcgcaa
gcggttgacaacgatagcctactggcgcgggtacgttgcccctggccgctggctgatctg
ctggccgggatccgcattgccgagaatgcgggtgaggctttggcgcggcgtgctggatta
gcacttggcgagcgtttcgtcacacgcgacggcagcctgatcggacgcgactggatacaa
agcgccgccgacggcccactgatcgtaggcagcatccgacgtgccgaagagctgcgcatc
ctacaaacatccggggaagagttggaacagacgatcgccgatcttgccgagcagcaggca
gcgctcaccgagcgtggccaggaactggaacaggagcgtgaagacggcttgcagtttctc
acccggctgagtcgcgaacgtgccacgatggatgctgaactcggtgccgggcgctcgcat
ctggagcatcttcaaaagcggcgtgaagaactgaccaaggaacatacggagttggccgaa
gaccgcaccgagatcctagatgaaatcgaagaagcccgcgaacgcctacatcagaccctg
gaacaaaccgaggaactcaccgcccgacgcgatgacctctccagccaacgcgacaggctg
cgagccgaggtcaatgcggcgcgcgccgaagaaggtcgtttgcgtgacgaacgccagcgg
ctgactctcggcgtcgaaaccagacgtgcatcccgtaacgccattgaagccgcggtggag
cgagcgcgacagcagattggcagccttgccgaacatcgcgacgaattgctgagcgctatg
cagcaggatgctgaaccgctagtggagcagggtgagcaattgcaggagcagcttgcactg
cgcatcaccgtggagactgagctggtggacgcacgcaaccgcatgcaggagctggatcaa
accctacgcgaatccgaacagcagcgccaccgccttgaacaagcggttgccgatgcgcag
cggatactggacggcaaacgtctggagcgccaggaacaactggtgcgccggcaaaccctc
gaggaacaacttgctgggcgtgactgcactgctcctgctattcttcagggcatggacgcg
ctagccagcgctgaggtttggcaagctgagctgtcacaggtgcgcagccatatccagcgc
cttggcaacatcaacctggccgccatcgacgaattcaacgaacaatccgagcgcatgcgc
tatctggagcaacagcacgacgatattagtgcatcgctggaaaccctggaggccgccatc
cgcaaaatcgaccgtgaaactcgtaaccgattcaaagagactttcgaccgtgtcaaccag
ggattgcagcaactttttccacgcgtgttcggcggcggccatgcctatttggagctgacc
ggcgacgatctgctggaaaccggcgtcaccattatggcgcgcccgccaggtaagcgtaat
tccagcattcatctactctctggcggcgagaaagcactcaccgcggtggcgctggtgttt
gccatcttccagctcaatccagcgcctttttgtatgctcgacgaggtggatgccccgctg
gacgatgccaatgttggccgtttctgcgagctggtgcgctcgatgtcggatcaagtgcag
tttatctttatcacccataataaggttacgatggaaattgccgatcacctgattggagtc
accatgcacgagcccggttgctcgcgcctggtgtcagtggatctggacgcagccgcgagc
ttggtggcggcctcctga
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