Candidatus Thiothrix singaporensis: HZT40_16295
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Entry
HZT40_16295 CDS
T06729
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
this03016
]
HZT40_16295 (truB)
Enzymes [BR:
this01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HZT40_16295 (truB)
Transfer RNA biogenesis [BR:
this03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HZT40_16295 (truB)
Prokaryotic type
HZT40_16295 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QLQ32895
UniProt:
A0A7L6AUV5
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All DBs
Position
complement(3225037..3225939)
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AA seq
300 aa
AA seq
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MSRRQFRKLNGILLLDKALGVSSNKALQDARFLFQAEKAGHTGSLDPLASGMLPVCFGEA
TKVSAFLLDAGKRYVAVATLGCISTTGDAEGDKINPRPVPALTDTAIEAVLACFRGAIMQ
VPPMYSALKKDGQPLYKLARQGVEVEREARAVTIHSLTLLERTQDSLMLAVACSKGTYIR
TLVEDIGEALGCGAYVSMLRREMVEPFDGLPMHTLESLRALAEQGREALDAVLLPLDTAL
PHLPALTVPETVLLRLRQGQKVRADVEGAELLRLYSESGEFIGLGYASHGVLSAKRLLAY
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgccgtcagttccgtaaactcaacggcattttgttgctggacaaggcattaggc
gtttccagcaataaggcgttgcaggatgcgcgttttctgttccaggcggaaaaggccggg
cataccggcagtcttgatccgttggcatctggcatgttgccggtctgtttcggtgaagcc
accaaagtttccgcttttctgcttgatgctggcaaacgttatgtcgctgtcgccactttg
ggttgcatcagcaccactggtgatgcggaaggcgacaagatcaatccgcgtccggttccg
gctctgacggatacggctattgaagctgttctggcttgttttcgcggcgcaatcatgcag
gttccgccgatgtattccgctttgaaaaaggatggccaaccgctctacaagcttgcccgg
cagggtgtggaagtggagcgggaagcccgcgccgtgaccatccattccctgaccttgctg
gaacgcacgcaggacagcctgatgctggcggtggcgtgcagcaaagggacttacatccgc
accctggtggaggatattggcgaggcgctgggctgcggcgcgtatgtgtcgatgctgcgg
cgcgaaatggtggagccgtttgacggcctgcccatgcatacgttggaaagtctgcgggcg
ttggcggaacaggggcgggaagcgttggacgccgtcttgttgccactggatacagccctg
ccgcatctgcctgcattgacggtgccggaaactgtcctgctgcgcttgcgccaagggcaa
aaagtgcgggcggatgtggaaggcgccgaattgttgcgcctgtacagtgagtccggtgaa
tttattggtctgggctacgctagccatggtgtgttgagcgccaaacgcttgcttgcctac
tga
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