Tarenaya hassleriana (spider flower): 104809434
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Entry
104809434 CDS
T04125
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104809434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
thj04131
]
104809434
Membrane trafficking [BR:
thj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104809434
Hops complex
104809434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_UBOX
Nup54_57_C
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
Vps39_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
104809434
NCBI-ProteinID:
XP_010533736
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MDRQVFTVDLLERYATKGRGVITCMAAGNDVIVLGTSRGWIIRHDFGVGDSYDIDLSGGR
SGEQSVHKVFVDPGGSHCICTITGPAGAETYYTHAKWPKPRVLSRLKGLVVNAVGWNRQQ
ITEASTKEIVLGTHNGQLFEMAVDEKDKREKYIKFLFELEELPEAFMGLQMETANISNGM
RYYVMAVTPTRLYSFTGIGTLESVFSSYKERAVHFMELPGEIPNSELHFFIKQRRAVHFA
WLSGAGIYHGGLNFGAQHSYPNGDENFVENKALLDYSKLSEGMEAIKPSSMALSEFHFLL
LIGNKVKVVNRISEQIIEELHFDLTTDSASRGVIGLCSDASAGLFYAYDQNSIFQVSVTD
EGRDMWKVYLDMKDYAAALANCRDPLQRDQVYLVQAETALASKEYLRAASFYAKINYVIS
FEEVTLKFISINEPDALRTFLLHKLDNLSKDDKCQITMISTWATELYLDKINRLLLEDDA
AIENRGSEYHLIVQEFRAFLSDCKDVLDETTTMKLLESYGRVEELVYFANLKEQYGIVVH
HYIQQGEAKKALEVLQKSSVPVELQYKFAPDLIMLDAYETVEAWMANKDLNPRRLIPAMM
RYSSEPHAKNETHEVIKYLEFCVHRLHNEDPGIHNLLLSLYTKQEDDNALLRFLQCKFGK
GRENGPEFFYDPKYALRLCLKEKRTRACVHIYSMMSMHEEAVALALQVDPELAMAEADKV
EDDEDLRKKLWLMVAKHVVKQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALID
DFKEAICSSLEDYNKQIENLKEEMNDATRGADNIRNDISALTQRYAVIDCDEECGVCKRK
ILMMTGDYRMAQGYTSAGPLAPFYVFPCGHSFHAQCLITHVTSCADKNQAERILDLQKQL
TLLGSETRRDANSSLPDETMTGTTTAEKLRSELDDAVASECPFCGEFMINEISRDFIKPE
EAQHAASWDIQPQKDIAFQRTILLPV
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggataggcaagtgtttacagttgatcttctcgagagatatgcaacgaagggtcgaggt
gtgatcacttgtatggctgctggcaatgatgtaattgttctcggaacaagtagaggatgg
atcatccggcatgattttggcgttggagattcttatgatatagatttgtctggtggtcga
tctggagagcaatctgtccacaaggtttttgttgatcctggcggtagccattgcatttgc
acgatcactggtcctgcaggagctgaaacttattatactcatgcgaagtggcccaagccc
cgggtgctgagccggttgaaaggtttagttgttaatgcagttggttggaacagacaacag
ataactgaagcttccacgaaggagattgttctaggtactcataatgggcaattgtttgag
atggctgtggatgagaaggacaagagagagaagtacatcaagtttttgtttgaactagaa
gaacttccggaggccttcatgggtttgcagatggaaacagctaatataagtaacgggatg
aggtactacgtcatggcggttactccgactcgactttattctttcactgggattggaaca
cttgaatctgttttttctagctataaagaacgtgcagtacattttatggaacttcctggt
gaaataccaaacagcgaactacacttctttataaagcagcggagagcagttcattttgct
tggctttcaggagcaggaatttatcatggcggcttaaattttggagctcaacacagttat
ccaaatggtgatgagaacttcgtggagaacaaggctctcttggactactcaaagctgagt
gagggcatggaagcaatcaaaccgagttctatggcactctcagagtttcatttcctcctc
cttattggaaacaaggttaaggttgtgaatcggataagcgaacaaattattgaagagctc
cactttgacctaacaacagattcagcttctaggggtgtaattggactgtgtagcgatgcc
tctgctggacttttctatgcatatgatcaaaattcgattttccaggtttctgtaactgat
gaaggccgagatatgtggaaggtttacctggacatgaaagactatgctgcagctttagca
aactgtcgggaccctctccagagagaccaagtttatttagttcaggcggaaactgcatta
gcctccaaagaatatcttcgagcagcatcattttatgccaagattaactacgtaatatcc
tttgaggaggtcaccttgaagtttattagcataaatgaaccggatgctttaagaacgttc
ttactgcataagcttgataatctttctaaggatgacaaatgccagataacaatgatatcc
acctgggcaactgagctttatctggataagataaatcgactactcttagaagacgatgct
gctatagaaaatcgtggttcagaatatcacttgatcgttcaagaattccgggctttctta
agtgactgcaaagacgtattggatgagacaaccacaatgaaacttctggagagttatggt
agggttgaagaattggtatactttgctaatctcaaggagcagtatggaattgttgttcat
cattatattcagcaaggggaagcaaagaaagcattggaggttctccaaaagtcttcagtt
cctgtcgaacttcagtataaatttgccccagaccttattatgcttgatgcttatgaaact
gtggaggcatggatggctaacaaagatcttaatccgaggagactaattcctgcaatgatg
cgttactcaagcgaacctcatgcgaagaacgagacacatgaagtaataaaatatctcgag
ttctgcgtccaccgtttgcataacgaagatccagggatccacaatttgctcctctcctta
tataccaagcaggaagatgacaacgctctccttcggttccttcaatgcaaatttggaaaa
gggagggagaatggccctgaatttttctatgatcccaaatatgctttgcgcctctgtctg
aaagaaaagagaactcgtgcatgtgtccatatatatagcatgatgtctatgcatgaagag
gcagtagcccttgctcttcaggtcgatcccgagcttgccatggctgaagctgataaggta
gaagatgatgaagacttaagaaagaaactctggctgatggttgcaaagcatgtagtcaag
caggaaaaaggaactaaaagggaaaacataaggaaggcaatagcctttctcaaagaaact
gatggtcttctaaagattgaagatatattaccgttctttccggactttgccttaattgat
gacttcaaggaagcaatttgttcatctctagaagattacaacaagcaaatagagaatttg
aaagaggaaatgaatgatgccacacgtggtgcagataacattagaaatgatattagtgca
ctaactcaaagatacgctgtaattgactgcgacgaggaatgcggggtctgtaaacgtaaa
atcttgatgatgactggggattacagaatggcccaagggtacacttcagctggaccactg
gctccgttctatgtgttcccttgtggacattctttccatgcacagtgcttgatcacgcat
gtcacaagttgcgcggacaaaaaccaagccgaacgtatactcgatttacagaagcaactg
acgttgcttggtagtgaaacacggagggatgcaaatagtagtctccccgatgaaaccatg
actggtacaactactgcagagaagctccggtcagagctggatgacgcggtagccagtgaa
tgtccattctgcggagaatttatgatcaatgagatcagtcgggattttattaaacccgag
gaagcacaacatgctgcttcatgggacatccaaccgcaaaaggatatagcgtttcagagg
accattctgttgcctgtttga
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