Tarenaya hassleriana (spider flower): 104812077
Help
Entry
104812077 CDS
T04125
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'-like
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104812077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104812077
03041 Spliceosome [BR:
thj03041
]
104812077
03032 DNA replication proteins [BR:
thj03032
]
104812077
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
104812077
Spliceosome [BR:
thj03041
]
Complex A
U1 snRNP components
Sm proteins
104812077
U2 snRNP components
104812077
Complex B
U1 snRNP components
104812077
U4/U6.U5 tri-snRNP components
104812077
Complex C
U2 snRNP components
104812077
DNA replication proteins [BR:
thj03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
104812077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104812077
NCBI-ProteinID:
XP_010537351
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPGKGKKIN
EEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSASAAAAAGPGIGRAAGRGVPTGP
LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPQLSAPPVIRPPGQMPPPPPAFAGQAPPPM
MRGPPPQGPPAYGMRPPPQQFPGPPPQFGQRPMVPPPGPMMRGPPGPPQRPGMPGPPPPR
PGMPPPPGGVPVFAPPRPGMPPPPNPHNQQQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagctccaagatgcttcagttcatcaattaccggatgcgggtgacg
atccaggacggtcggcaactggttgggaagtttatggcgttcgaccgccacatgaacctc
gtactcggagactgcgaggagttccggaagcttcctccggggaaggggaagaagatcaac
gaggagagagaggaacgtcgaacactcggtttggtgttgctcagaggtgaagaagttatc
tcaatgaccgtcgagggtcctcctccgccggaggaatctcgtgccaagtctgcttctgcg
gcggcggcagctggtcccggaatcggccgtgccgccggtcgtggagtacccaccggtccg
cttgttcaggctcagcctggacttgcaggtcctgttcgtggagtaggtggaccagctccg
ggtatgatgcaaccccagatttcccgacctccgcagctttcagcaccgccggtgattcgg
cctccgggacagatgccgccaccaccgccggcatttgctggccaagctccgccacctatg
atgcgaggccctccgcctcaaggtcctccggcgtacggaatgaggccgccgccgcagcag
ttccctgggccaccaccgcaatttgggcagagacccatggttcctcctccaggtccgatg
atgagaggacctccgggtccgccgcagaggcccggaatgccggggcctcctccgcctcgt
cctggcatgcctccaccgcctggtggtgttcctgtatttgctcctccgcgtcctggcatg
ccacctccaccgaatccccataatcagcagcagtga
DBGET
integrated database retrieval system
