Tetragenococcus halophilus NBRC 12172: TEH_01120
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Entry
TEH_01120 CDS
T01640
Name
(GenBank) putative pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thl03009
]
TEH_01120
Enzymes [BR:
thl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
TEH_01120
Ribosome biogenesis [BR:
thl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TEH_01120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
11261453
NCBI-ProteinID:
BAK93439
LinkDB
All DBs
Position
complement(127860..128714)
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AA seq
284 aa
AA seq
DB search
MEYSITLPTFQKTITLRELLETQWLVPRKVRHFLRTRKNVWCNHQPIKFHEMVHANDMIT
LRIEEDDYNYQTVKAGSKENIEVLYEDEHLIVVNKASGVKTHPNQPDETATLLNDLSAYL
GKKNERPYVVHRLDKETSGAILFAKSPLVLPILGRLLEEKKIYRNYQAIVWGKLTQDCTI
DKRIGRDRHDKRKRIISERQGKTAITYVKVHQVYKQTSEVYCSLATGRTHQIRVHLASIG
HPVVGDPLYQNKEEKRLALHAYKIKFLHPFTQEQIEVIAKPGLW
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaatattcaatcactttacctacttttcaaaaaacaataacgcttcgtgaattgtta
gaaacccagtggcttgttcctcgaaaagtgcgtcattttctgcgaacacgtaaaaatgtc
tggtgtaaccatcaaccgataaaatttcatgaaatggtgcatgctaatgatatgattacc
ttgcgaattgaagaagatgattataattatcaaacagtaaaagctggatcaaaagaaaat
atcgaagttttatatgaagatgaacatttaattgttgtcaataaagctagcggggtgaaa
acacatcctaaccaacccgatgaaacagctacgctcttaaatgacctaagtgcttaccta
ggtaaaaaaaatgaacgaccttatgtcgttcatcgcctggacaaagaaacgtctggcgct
atcttgttcgctaaaagtccccttgttctccctattttaggaagactcctagaagaaaag
aaaatctaccgaaactatcaagcaatcgtttggggcaagctaacacaggactgtacaatc
gataaaagaattggtcgtgatcgccatgataaacgcaagcgtatcataagtgaacgccag
ggtaaaactgccattacctatgtaaaagtccatcaagtgtacaaacagaccagtgaagtc
tattgtagcctcgccacaggcagaacacatcaaatacgtgttcatttagcaagtatagga
cacccagttgtaggtgatccactatatcaaaacaaagaagaaaagcgcctagctttacat
gcctacaaaataaaattccttcacccatttactcaggaacaaatcgaggtaatagctaag
ccaggcctttggtaa
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