Thermoflexus hugenholtzii: KNN16_11270
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Entry
KNN16_11270 CDS
T07254
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
thug
Thermoflexus hugenholtzii
Brite
KEGG Orthology (KO) [BR:
thug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thug03021
]
KNN16_11270
Transcription machinery [BR:
thug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KNN16_11270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_16
Phage_antitermQ
HTH_23
NLRC4_HD2
DUF6456
HTH_38
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QWK09942
LinkDB
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Position
complement(2488514..2489068)
Genome browser
AA seq
184 aa
AA seq
DB search
MGLLTPHPEERRWIARARKGDPEAIAALYQHYADGVYRYLLYRVGDAELAEDLTADVFLK
MIEDLPRYEERGLPFGAWLFRIARARLIDHWRRQGRRPLVALEDTETGPQISQDIPEDEI
AVSEMIQRALRVLTEEQREVVVLRFLVGMSLEEVARAMGKSVGAVKALQHRALSALARYL
EKIR
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgctcacccctcatcccgaagagcgacgctggatcgcccgggcgcggaaggga
gatccggaggccatcgcggccctgtatcagcattacgccgatggcgtctaccgctatctg
ctctaccgggtgggcgacgccgagctggcggaggatctcaccgcggatgtgttcctcaag
atgatcgaggacctgccgcggtatgaggagcggggccttcccttcggcgcctggctgttc
cgcatcgcccgggcccgtctgatcgatcactggcgacgacaggggcggcgccccctcgtg
gcgctggaggacacggagacggggccgcagatcagccaggacatcccggaggacgagatc
gcggtctcggagatgatccagcgggcgctgcgggtgctcaccgaggagcagcgggaagtg
gtggtcctgcgcttcctggtcgggatgagcctggaggaagtggctcgggcgatggggaaa
tccgtgggcgctgtcaaggccctccagcatcgcgccctgagcgccttagcccgttatctg
gagaagatccggtga
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