KEGG   Thermococcus sp. 2319x1: ADU37_CDS07660
Entry
ADU37_CDS07660    CDS       T04245                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
thv  Thermococcus sp. 2319x1
Pathway
thv03030  DNA replication
thv03410  Base excision repair
thv03420  Nucleotide excision repair
thv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:thv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ADU37_CDS07660
   03410 Base excision repair
    ADU37_CDS07660
   03420 Nucleotide excision repair
    ADU37_CDS07660
   03430 Mismatch repair
    ADU37_CDS07660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thv03032]
    ADU37_CDS07660
   03400 DNA repair and recombination proteins [BR:thv03400]
    ADU37_CDS07660
Enzymes [BR:thv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ADU37_CDS07660
    6.5.1.6  DNA ligase (ATP or NAD+)
     ADU37_CDS07660
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     ADU37_CDS07660
DNA replication proteins [BR:thv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    ADU37_CDS07660
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     ADU37_CDS07660
DNA repair and recombination proteins [BR:thv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ADU37_CDS07660
   NER (nucleotide excision repair)
    Other NER factors
     ADU37_CDS07660
   MMR (mismatch excision repair)
    Other MMR factors
     ADU37_CDS07660
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Tcp10_C PilJ_C Sel1
Other DBs
NCBI-ProteinID: ALV62465
UniProt: A0A0U3SXJ7
LinkDB
Position
complement(655854..657536)
AA seq 560 aa
MLYRELAELYKRLEKTTLKTLKTKFVAEFLKKAEDPELLEIIPYLILGKVFPDWDERELG
VGEKLLIRAVSMATGINSDEIENSVKDTGDLGESVTLALQKRKQKSFFSQPLTIKRVYST
LVKVAETTGEGSQDRKLKYLANLFMDASPEEGKYLARTILGTMRTGVAEGLLRDAIAEAF
RVKVELVERAYMLTSDFGFVAKVARLEGDEGLLKVEIQVGKPIKPMLAQMAANVREALME
MGGEAEFEIKYDGARVQVHKDGEKVIVYSRRLENVTRSIPEVVERIKESLKPERVIVEGE
LVAVGEEGRPRPFQYVLRRFRRKYNIDEMVEKIPLELNLFDVLYVDGKSMIDVQFIERRK
TLESIVTTNEWIKVAENLITKNPEEAEKFYHRALDLGHEGLMAKRLDSVYEPGNRGKKWL
KIKPTMENLDLVIIGAEWGEGRRSGVLSSFLLGAYDPVRGDFVPVGKVGSGFTDEDLVEF
TKMLKPFIKREHGKLVEIEPKIVIEVTYQEIQKSPKYESGFALRFPRYVALREDKGPEDA
DTVQRIAELYQLQERMKGGK
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgttatacagagaactggccgagctttataaaagacttgagaaaacgactctgaagacc
cttaagacaaaatttgtggcagaatttttaaagaaagctgaagatccagagctgttggaa
attattccctatttaatcctcggtaaggtctttccggattgggatgagagagagcttggc
gtaggtgagaagctattgataagggccgtttctatggccactggaataaatagtgacgag
atagaaaattccgtaaaagatactggcgatttgggggaaagcgttacccttgcccttcaa
aagaggaagcaaaaaagctttttctcccaaccccttacaataaaaagagtttatagcact
ttagttaaagttgccgaaaccaccggcgaagggagtcaggatagaaagctgaaatacctc
gccaatctctttatggatgcttctccagaggaagggaagtatttggcaaggacgatactt
gggaccatgaggacgggagttgcagaaggattgctgagggatgcaatagcggaggcgttt
agggtaaaggttgagcttgttgagagggcttacatgcttacgagtgactttggatttgtg
gctaaagtagcaaggcttgagggagacgaaggtcttttgaaagtagaaatccaagtaggg
aagcccattaagccgatgctcgcccagatggcagccaacgttagagaggctctaatggaa
atgggtggagaggcggagtttgagattaaatatgacggtgcgagggttcaggttcacaag
gacggagagaaggttatcgtttattcaaggcgtcttgaaaacgttacgagatcaattcca
gaggttgttgagaggattaaagagtctttaaagccggagagagttattgtagaaggcgaa
ctcgtcgccgttggggaagaaggaagaccgaggccgtttcagtacgtgttgaggagattt
agaaggaagtacaacatagatgagatggttgaaaaaataccccttgagcttaacctcttc
gatgttctttacgttgatggcaaaagcatgatagatgtccagttcatagagaggaggaag
acccttgaaagcattgtgaccacaaacgaatggataaaagtggcggagaacttaataaca
aagaatccagaagaggccgagaagttctatcacagagcccttgacctgggtcatgaagga
ctaatggcaaaaaggctcgactcagtttacgagcccggtaacaggggcaagaagtggtta
aagattaagccaacaatggagaatctcgatttagttattataggcgcggaatggggcgaa
gggaggagaagtggagtcctgagctcgttccttttaggtgcatatgatcccgttagggga
gatttcgtcccggttggtaaagtgggaagcggatttactgatgaggatttagtggagttc
acaaagatgcttaaaccctttataaaaagggaacacggcaagttagttgaaatagagcct
aagattgtgattgaagttacttatcaggagattcagaagagccccaagtacgagagcggc
tttgcactgaggttcccgagatacgttgcgctaagagaggacaagggaccagaggatgcg
gatacagtccagaggatagccgagctctaccaactgcaggagagaatgaaaggaggtaag
tga

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