Thioclava nitratireducens: BMG03_08675
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Entry
BMG03_08675 CDS
T04697
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
thw
Thioclava nitratireducens
Pathway
thw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BMG03_08675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thw03400
]
BMG03_08675
Enzymes [BR:
thw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BMG03_08675
DNA repair and recombination proteins [BR:
thw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BMG03_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AQS47870
LinkDB
All DBs
Position
complement(1799315..1800739)
Genome browser
AA seq
474 aa
AA seq
DB search
MRTITLPEIGTFEAWRDEARAGLGAGIPPEELLWHRGAGEADLFAQDAPTPTGSAVSVPK
GFVDLARLVVCHRDPERFARAYAVLWALRSDKRLLEDRADPRIDRLNRMAKEVSRDRHKM
TAFVRFREIGAPDAPRRRFAAWFEPTHYICELTAPFFVKRFGDMDWSIFTPDLTAHFEAG
KLRFSEGQPRPDLPEDAAEDLWRTYFRNIFNPARLKVDAMQSEMPRKYWHNLPEASLIPE
MIATAQARAEEMALSAPTLAPARAGKITERLASDRATPPPVGDRAELLAGLNACRRCPLW
ENATQPVPGEGPLDAPLMIVGEQPGDFEDLEGRPFVGPAGQLFDEVAARAGLCRDRAFIT
NAVKHFKFTPRGKRRIHQSPDRQEIHHCRWWLDRERALVKPKAILAMGATALESLTGDRR
GLLKRRGTVEVLDDGTPMLITMHPSYLLRLPDMEKPAMLRAFEADLVRAVQMVA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgatcaccctgcccgagatcggcacgttcgaggcctggcgagacgaggcccgc
gcaggcttgggcgctggcatcccgcccgaggagcttctctggcatcgcggggcgggtgag
gccgatctcttcgcgcaggacgcccctacccccacgggcagcgctgtgagcgtgccaaag
ggctttgtcgacctcgcccggctcgtggtctgtcatcgcgacccggaacgcttcgcgcgg
gcttacgcagtgctctgggcgctgcgatccgacaagcgcctgctggaagaccgcgccgat
ccgcgcatcgaccgactgaaccgcatggccaaggaggtctcgcgcgaccgccacaagatg
acggccttcgtgcgcttccgcgaaatcggggcgcccgacgccccacgtcgccgctttgcc
gcgtggttcgaacccacgcattacatctgcgagctgaccgcgccgttcttcgtgaaacgt
ttcggcgacatggactggtcgatcttcacgcccgatctgacggcgcatttcgaagcgggc
aaactgcgcttcagcgaggggcagccgcgccccgacctgcccgaggatgccgccgaagac
ctctggcgcacctatttccgcaacatcttcaacccggcgcggctgaaggtcgacgcgatg
caatccgaaatgccgcgcaaatattggcataacctccccgaagccagcctcatccccgag
atgatcgccaccgcgcaggcccgcgcagaggagatggctttgagtgcccccacgctggcc
ccggcccgtgcaggcaagatcaccgagcggctggcaagcgaccgcgccaccccgccgcct
gtcggcgaccgcgcggagctgctcgccgggctgaacgcttgccgccgctgcccactttgg
gagaacgccacgcagccagtgccgggcgaagggccgctggatgcgccgctgatgatcgtg
ggcgagcagccgggcgatttcgaggatctcgagggccgccccttcgtcggccctgcaggc
cagcttttcgacgaggtggctgcgcgggctggtctgtgccgcgatcgcgccttcatcacc
aatgcggtgaagcatttcaaattcaccccgcgcggcaaacggcgcatccaccagtcgccc
gaccggcaggaaattcatcactgccgctggtggctcgaccgggaacgcgctctggtaaag
ccgaaggcgatccttgcgatgggcgcgacggcgctggagagcctcaccggggatcggcgc
ggccttctcaagcggcgcggcacggtggaggtactcgacgatggcacgccgatgctgatc
accatgcacccgtcctacctgctgcgcctgcccgacatggaaaagcccgctatgctgcgg
gctttcgaggcggatctggtccgcgcggtgcagatggtggcgtga
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