Thalassospira indica: DY252_18225
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Entry
DY252_18225 CDS
T05581
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tii
Thalassospira indica
Pathway
tii02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DY252_18225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tii02000
]
DY252_18225
Enzymes [BR:
tii01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DY252_18225
Transporters [BR:
tii02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DY252_18225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_16
AAA_29
AAA_21
AAA
AAA_24
AAA_22
Citrate_bind
Zeta_toxin
MMR_HSR1
ABC_ATPase
AAA_15
AAA_23
APS_kinase
nSTAND3
AAA_25
DUF5906
nSTAND1
DUF6580
Motif
Other DBs
NCBI-ProteinID:
AXO15945
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All DBs
Position
3841720..3843528
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AA seq
602 aa
AA seq
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MAKKAGIKSLPKNSLDHTAEHWGTWPLVKRIVRDAVAPYLGKILLALLCMALMAGATGLY
ALLMDPIINDVFINKKENMLVPVGAAVLGSFALKGFANYGQTVLMSYVGGRILADLQNSL
YEHVIRLDIGFFHSTNTGKLITRFTNDITAMRAAVSNSLTGFGKDLLTAAVLVGVMFYKD
WLLAIIAFTVFPAAIYPIARLGKRMRKVSANTQQQIGEFATLLEQTFQGIRHVKAYGMEP
YECSRMGKLVETVFKLSFKASTVSARSSPIMETLGGAAITAIIIYGGNRVIDGASDPGSF
FAFITALLLAYEPVKRLANINITLQQGLAASQRVFTVLDIEPEIKDAPDAKELAVSGGNI
NFKNVAFAYTPEITALREIDLDIKAGETVALVGPSGAGKSTILNLIPRFYDIDQGAITID
GQDIRNVTLESLRKATALVSQEITLFDDTVRANIAYGRAGASDAEIEQAARQAAAHDFIG
QLQHGYDTIVGEHGVKLSGGQRQRIAIARAMLKNAPILLLDEATSALDTESERHIQGALA
ELMKGRTTLVIAHRLSTIIDADKICVVSNGRVTEQGKHEELLALGGAYAHLYNLQFSEEN
GN
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaggccgggatcaaatcattgccaaagaattcgttggatcatactgcagaa
cactggggtacctggccgttggtcaagcgtatcgtgcgagatgcggttgccccctatctt
ggcaaaatactgcttgcgcttctctgcatggccctgatggccggggcgaccggcctttat
gcgcttttgatggatccgatcatcaatgatgtgttcatcaacaagaaggaaaacatgctg
gtgcccgtcggggcagcggttcttggatcctttgccctcaaaggctttgccaactatggc
cagacggttttgatgagctatgtcggcgggcgtattctggccgatctgcaaaacagcctg
tatgagcacgtcattcgccttgatataggctttttccacagcacgaataccggcaagctg
atcacgcgctttaccaacgacatcaccgcgatgcgcgcagcagtttcaaactcgctgacc
ggttttggcaaagaccttctgactgcggccgtccttgtcggcgtgatgttctataaggac
tggttgctcgcgatcatcgcctttaccgtatttcccgctgcgatctatccgattgcgcga
ctgggtaaacgcatgcgcaaggtgtcagccaacacccagcaacagattggcgaattcgcc
accttgcttgaacaaaccttccagggcattcgccacgtgaaggcatatggcatggagccc
tatgaatgttcacgcatgggcaagctggttgaaaccgtcttcaaactgagcttcaaggca
tcgacggttagcgcgcgttcctcccccatcatggaaacacttggtggtgcggcgattacc
gcgatcatcatttatggcggcaaccgcgtgatcgacggggcaagcgaccccggaagcttc
tttgcctttatcacagccttgcttctggcctatgagccggtcaaacgtttggccaatatc
aacatcaccttgcagcaaggccttgctgcatcccagcgcgtcttcacggttcttgatatt
gaacctgaaatcaaggacgcaccggatgccaaggagctcgcggtttcgggtggcaacatc
aacttcaaaaacgttgcctttgcctacacccctgaaatcacagcactccgcgagattgat
cttgatatcaaggcgggcgaaaccgtggcccttgtcggcccgtcgggggctggtaaatcg
accatcctcaacctgatcccgcgtttctatgacattgatcagggtgccatcaccattgat
ggtcaggatatccgcaacgtgacgcttgaaagcctgcgcaaggcaaccgccctggtcagt
caggaaatcaccctgtttgacgatacggtacgggccaacatcgcctatggtcgcgcaggc
gcctcggatgccgagatcgaacaagccgcacgtcaggccgccgcccacgactttatcgga
cagcttcaacacggctatgacacgattgtcggcgagcatggtgtgaagctgtcgggtggc
cagcgtcagcgtatcgcgattgcgcgcgccatgctgaaaaacgcgccgatcctgttgctt
gatgaagcaacctcggcccttgatacggaatccgaacgccatattcagggggctttggcc
gaactgatgaaaggccggacgacccttgtaattgcgcaccgtctgtcgaccatcattgat
gccgacaagatttgcgttgtcagcaatggtcgcgtgaccgaacagggcaaacacgaagaa
ttgctagcactgggaggggcttatgcgcacctctataacttgcaattctcggaagaaaac
ggaaactga
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