Thalassospira indica: DY252_18445
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Entry
DY252_18445 CDS
T05581
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
tii
Thalassospira indica
Pathway
tii02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DY252_18445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tii02000
]
DY252_18445
02044 Secretion system [BR:
tii02044
]
DY252_18445
Transporters [BR:
tii02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
DY252_18445
Secretion system [BR:
tii02044
]
Type I secretion system
Adhesin protein transporter
DY252_18445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Zeta_toxin
AAA_16
AAA_15
AAA_29
nSTAND1
RsgA_GTPase
AAA_23
AAA
AAA_22
AAA_5
MMR_HSR1
DUF815
Motif
Other DBs
NCBI-ProteinID:
AXO15983
LinkDB
All DBs
Position
complement(3898047..3900191)
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AA seq
714 aa
AA seq
DB search
MMKKLENMDYAMNYRMGLESTDALSDFDACVWPLLQALGWRGLPRQVAEALPHMDQALDL
TDFRNVMAHLNYQSREIDATLDQIDERLMPCLFVPDEGTALVVIRPEENGVRVFDGGTDR
EMVIKLSALPGKIYQFSAADRRERYLEDDKRGWFGGIADRFSGLLHQLLAMTFVLNILAL
ATPIFVMGIYDRVIGTRSIPMLIQFAIGIGIVLILSWVLRSLRSQIVSHFGARLDTLVSG
AIFERLLSLPPAFTERAPVGVQISRIRDFESVREFFTGPMALVMMEMPFVPLFLIVMFYL
GGWLALIPIALIGVFALIGIVAFPIVARRVSELGRHGANRQEFLVETVGKMSALKYTASE
QRWLARFRDISADTAYSGYRVAMVNNVINTLAQVLMITSGALVLAFGAQRVMEAQMSVGA
LVASMMLAWRVLGPINQAFLGMPRLAQLRGSVRQINRLMTIAPEGDLVPRSVEQHRFDGA
VTFSRVSFRYSADSDPALVGVNFDIKPGQVVAVVGANGAGKSSLIKLIAGMYQPQAGAVL
IDGADIRQMDPQTLRQAISYVPQDIEFFRGSIAQNLRLANPVATDDDLRMACMAAGILDE
IESLPNGFKTRVGDQHSSRFSASFLQRLALARAFVREAPIILFDEPTNGLDQRADRAFQS
TINRLRGGSTIFLITHRPSHLDLADRILVLEGGQLRGDGPPERIKQQVIDGGYL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaagctcgaaaacatggactatgcgatgaactatcggatggggctggaaagc
accgatgcgctgtccgatttcgacgcatgtgtctggccgctgcttcaggccttgggatgg
cgcggattgccgcgtcaggtcgccgaggccctgccgcatatggatcaggcgcttgatctg
accgatttccgcaatgtcatggcgcatctgaactatcagtcacgcgaaatcgacgcgacg
cttgatcagatcgacgaacgcctgatgccgtgtctgtttgtcccggacgagggaacggcc
cttgtcgtgatccggcccgaagaaaatggtgtgcgcgtctttgatggcggcacggatcgg
gaaatggtcatcaagctatcggcccttccgggcaagatttatcagttctcggcggcggat
cgccgtgaacgttatctggaagatgataagcgcggctggtttgggggtattgccgaccgg
ttttcggggctgcttcatcagttgctggcgatgacgtttgttttgaacatcctggcgctg
gcaaccccgatcttcgtcatgggcatctatgaccgtgtgatcggcacacgctcaatcccg
atgttgatccagtttgccatcgggattggcatcgtcctgatcctgagctgggttttgcgc
tccttgcgcagtcagatcgtcagtcacttcggtgcccgcctcgatacgcttgtcagtggt
gccattttcgaacggctgttgtccttgccaccggccttcaccgaacgtgcgccagtaggt
gtacagatttcgcgtattcgcgactttgaaagcgtgcgtgaattctttaccgggccgatg
gccctggtgatgatggaaatgccgttcgtgccgctgttcctgattgtcatgttctatctt
ggcggctggctggcattgatcccgattgcattgatcggtgtgttcgcactgatcggcatc
gttgcatttccaattgtcgcgcgccgcgtttccgaacttggtcgtcatggcgccaaccgt
caggaattcctggtcgagaccgtcggcaagatgtcggcactgaaatacaccgcatccgag
caacgctggctggcacgctttcgcgatatttctgctgatacggcctattccggctatcgg
gtggcgatggtcaataacgtcatcaatacattggcccaggtactgatgattacgtccggc
gcgcttgtgcttgccttcggcgcgcagcgggtgatggaagcccaaatgagtgtcggtgcg
ctggtggcatcgatgatgctggcctggcgggttcttggccctatcaatcaggcgtttctg
ggcatgccacggctggcgcagttgcgcggcagtgtgcgccagatcaatcgcctgatgacc
attgcgcccgaaggggaccttgtcccgcgttcggtcgagcaacatcgttttgacggtgcc
gtgacattttcacgtgtcagtttccgctatagtgcggattccgatccggccctggtcggg
gtcaatttcgatattaaaccgggccaggtggttgccgtggtcggtgcgaacggagcgggg
aaatcatcgctgatcaaattgattgcgggcatgtatcagccgcaggcgggggccgttttg
attgatggtgcggacatccgccagatggatccgcagaccctgcgtcaggccatttcctat
gtgccgcaggatatcgagtttttccgtggatcgattgcgcaaaacctgcgtctggccaat
ccggtcgcaaccgatgatgatctgcgcatggcctgtatggcggcaggtattcttgatgaa
attgaatcacttccgaacgggttcaagacccgcgttggtgatcagcattcatcacgcttt
tcggccagtttcctgcaacggctggcacttgccagggcatttgtgcgcgaagcgccgatc
attttgtttgatgaacccaccaatggtctggaccagcgcgccgaccgtgccttccaaagc
acgatcaatcgtctgcgtggtggttcgaccattttcctgattacccatcgaccaagtcat
ctggatttggcggaccgcattcttgtgcttgaaggcggccagttgcgcggcgacgggccg
cccgaacggatcaagcagcaagtgatagacggaggctacctatga
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