Tuwongella immobilis: GMBLW1_36400
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Entry
GMBLW1_36400 CDS
T06428
Name
(GenBank) recombinase : Helicase, RecD/TraA family OS=Thiorhodococcus drewsii AZ1 GN=ThidrDRAFT_0629 PE=4 SV=1: HHH_4: AAA_30: UvrD_C_2
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tim
Tuwongella immobilis
Pathway
tim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GMBLW1_36400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tim03400
]
GMBLW1_36400
Enzymes [BR:
tim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GMBLW1_36400
DNA repair and recombination proteins [BR:
tim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GMBLW1_36400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
PIF1
nSTAND3
AAA_22
HHH_2
TrwB_AAD_bind
NTPase_1
DEAD
T2SSE
HHH_3
AAA_16
UvrD-helicase
RsgA_GTPase
TsaE
AAA
PhoH
SLFN-g3_helicase
ATP_bind_1
AAA_14
AAA_28
ATPase_2
AAA_29
AAA_5
DUF3127
ABC_tran
KTI12
Ank
NB-ARC
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
VTS08462
UniProt:
A0A6C2YWM7
LinkDB
All DBs
Position
1:complement(6389865..6392105)
Genome browser
AA seq
746 aa
AA seq
DB search
MSETISGSIERITFHSVESGYAVLRVKVSGRRDLLTVVGTISSVVAGEYIQATGQWVTDR
EHGIQFKAESLITTPPHTIEGIVKYLSSGLVRGIGPHYAKKIVEVFGDRTLQVIDESPTH
LSEIKGIGPRRLQQIRQSWEEQKGVRSIMLFLKSHGVGTARAVRIYKTYGDQAVELVRAN
PYRLTTDIWGVGFKIADELARSLGLPANSVMRARAAIRFILQELSASGNVGSPEPLVIEK
VIELTDIDEPMIRDAIDECVLEKEIVREIPPREALALAGSDPWLFLTPLHLAETNVARLL
VRLNRGAHPLANEDAATLIAGIEAKMGITLAKTQRLAIEASLQEKLLVITGGPGVGKTTI
VRGIIEIFNAKRQRIVLCAPTGRAAKRLSESTGQEAKTIHRLLEFDPTNGGFKKSADEPI
EADLLVMDEASMVDIVLLNQLLRAVPPWACVVLVGDVDQLPSVGPGTVLADLIHSGQIPV
VRLTEIFRQAEQSWIVRAAHAINSGEEPQSAPAGQGDFYFVEAREPEQVLERIVMMVRER
IPSRFGLDPLVDVQVLAPMNRTELGVRNLNSVLQAALNPESPQRKEVQRYGQTFRVGDKV
IQTQNNYQKEVFNGDIGRIQSIDEVGQEVEIHFEGRPVVYEFNELDEVSLAYAISVHKSQ
GSEYPAVVIPVHTQHYIMLQRNLFYTGVTRGKRLVVLVGSRYALRQAVNNAEIRNRCTLL
RWRIQALAHAADASDARIDSGQRGRV
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacgatcagcggcagcatcgaacgcatcacctttcacagcgtggaatcggga
tatgcggtgctgcgcgtgaaagtttcggggcggcgtgatctgctcaccgtcgtcggcacc
atttccagcgtggtggccggggaatacatccaggccaccgggcaatgggtgaccgatcgc
gagcacgggattcaattcaaagccgaatcactcatcaccacgccgccgcacaccatcgaa
ggcatcgtcaaatatctcagttccgggctggtccgcggcatcgggccgcattacgcgaag
aagatcgtcgaagtattcggcgaccgcaccttgcaagtgattgacgaatcgcccacccat
ctcagcgaaatcaaaggcattggcccgcgacgccttcagcagattcgccaatcgtgggaa
gaacaaaagggcgtgcggtcgatcatgctgtttctgaaatcgcacggggtggggacggcc
cgcgcggtgcggatttacaaaacctatggcgatcaagcggtggagctggtgcgggcgaat
ccgtatcggctgaccaccgatatttggggcgtgggcttcaaaattgcggatgaattggcg
cgcagtctgggactgcccgcgaattcggtgatgcgggcgcgggcggcgatccgcttcatc
ttgcaggagctttccgcgtcggggaatgtcggttcgccggagccgttggtcatcgagaaa
gtcatcgaattgacggatatcgatgagccgatgatccgcgacgccatagatgaatgtgtg
ctggaaaaagagattgtccgcgagattccgcctcgggaagcgttggcgctggccgggagc
gatccgtggctgtttctgacgccgttgcatctggcggaaaccaacgtcgcgcggctgctg
gtgcggctgaatcggggcgcgcatccgctggcgaatgaagatgccgccacgctgattgcc
ggcattgaagcgaaaatgggcatcacgctggccaagacgcagcgcttggcgatcgaggca
tcgcttcaggaaaaattgctggtcatcaccggcggacccggcgtggggaagaccaccatc
gttcgcggcatcatcgaaattttcaacgccaagcggcagcgcattgtgctgtgtgccccg
acggggcgagccgcgaagcgactcagcgaatcgaccgggcaggaagcgaagaccatccat
cgactgttggagttcgatccgaccaatggcggattcaaaaagtctgccgatgagccaatc
gaggccgatctgctggtgatggacgaagcctccatggtggatattgtgctgctgaatcaa
ctgctgcgtgcggtgccgccttgggcgtgtgtggtgctggtgggagatgtcgatcagttg
ccatcggtcgggccggggacggtgctggccgacctgatccactcggggcaaattccggtg
gtgcggctgaccgagatttttcgccaggcggaacagtcgtggattgtgcgggctgcccat
gcgatcaattcgggcgaggagccgcaatcggccccagccgggcagggcgatttctacttc
gtggaggcccgcgaaccggagcaggtgctggagcgcatcgtcatgatggtgcgggagcgg
attccgtctcgattcgggctggatccgctggtggatgtgcaggtgttggccccgatgaac
cgcaccgaattgggcgtgcgcaacctcaacagcgtcttgcaggctgcgctcaacccggaa
tcgccccagcgcaaagaggtgcagcgctacggccagaccttccgcgttggcgacaaggtg
attcaaacgcaaaataactatcagaaagaagtcttcaacggcgacattggtcgcattcaa
agcattgatgaggttggccaagaggtggagatccacttcgaagggcgaccggtggtgtac
gaattcaacgaactggatgaagtgtcgttggcttacgccattagcgtgcacaaatcccaa
ggttcggaataccccgcggtggtgattccggtgcatacgcagcattacatcatgctgcaa
cggaatttgttctacaccggcgtgacgcgcggcaagcgcttggtggtgctggttggctcg
cgatacgccttgcgacaagcggtgaacaatgccgagattcgcaatcgctgcacgctgctg
cgctggcgaattcaggcgctggcccatgcggcggatgccagcgatgcgcgaatcgattcc
gggcagcgggggcgagtctaa
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