Thiomonas intermedia: Tint_0115
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Entry
Tint_0115 CDS
T01227
Name
(GenBank) Ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
tin
Thiomonas intermedia
Pathway
tin00630
Glyoxylate and dicarboxylate metabolism
tin00710
Carbon fixation in photosynthetic organisms
tin01100
Metabolic pathways
tin01110
Biosynthesis of secondary metabolites
tin01120
Microbial metabolism in diverse environments
tin01200
Carbon metabolism
Module
tin_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Tint_0115
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Tint_0115
Enzymes [BR:
tin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Tint_0115
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ADG29528
UniProt:
Q9ZHZ1
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All DBs
Position
129187..130608
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AA seq
473 aa
AA seq
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MAVKTYQAGVKEYRQTYWMPEYTPLDTDLLACFKITPQAGVDREEAAAAVAAESSTGTWT
TVWTDLLTDMDYYKGRAYRIEDVPGDDTCFYAFIAYPIDLFEEGSVVNVFTSLVGNVFGF
KAIRALRLEDIRFPIAYVKTCNGPPNGIQVERDVINKYGRPLLGCTIKPKLGLSGKNYGR
AVYECLRGGLDFTKDDENINSQPFMRWKQRFDFVQEATLKAEQETGERKGHYLNVTAPTP
DEMFKRAEYAKEIGAPIIMHDYITGGFCANTGLAQWCRDNGMLLHIHRAMHAVLDRNPHH
GIHFRVLTKILRLSGGDHLHTGTVVGKLEGDRASTLGWIDLLRESYVPEDRSRGIFFDQD
WGSMPGAFAVASGGIHVWHMPALVTIFGDDSVLQFGGGTLGHPWGNAAGAAANRVALEAC
VQARNEGRQVEKEGREILTAAAQHSPELKIAMETWKEIKFEFDTVDKLDVTNK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaagacctatcaggccggcgttaaggagtaccggcaaacctattggatgccg
gagtacacccctctggacaccgatctactggcctgcttcaagatcaccccgcaagcgggc
gtcgatcgtgaagaggctgcagccgctgtggcggccgagtcgtccaccggcacctggacc
acggtgtggaccgacttgctgaccgacatggactactacaagggccgcgcctatcgcatc
gaagacgtgcccggcgacgacacctgcttctacgccttcatcgcctatccgatcgacctg
ttcgaagaaggctcggtggtcaacgtgttcacctcgctggtgggcaatgtgttcggcttc
aaggccatccgcgccctgcgcctggaagacatccgcttcccgatcgcctacgtcaagacc
tgcaacggcccgcccaacggcatccaggtcgagcgcgacgtgatcaacaaatacggccgt
ccgctgctgggctgcaccatcaagcccaaactgggtctgtcgggcaagaactacggccgc
gccgtgtacgaatgcttgcgcggcggtctggatttcaccaaggacgacgagaacatcaac
tcgcagcccttcatgcgctggaagcagcgtttcgacttcgtgcaggaagccacgctcaag
gccgagcaggaaaccggcgagcgcaagggccactacctgaacgtgaccgccccgaccccg
gacgaaatgttcaagcgtgcggagtacgccaaggaaatcggcgcgcccatcatcatgcac
gactacatcaccggcggcttctgcgccaacaccggcctggcgcaatggtgccgcgacaac
ggcatgctgctgcacatccaccgcgccatgcacgccgtgcttgaccgcaacccgcaccac
ggcatccacttccgcgtgctgaccaagatcctgcgtctgtcgggtggcgaccacctgcac
accggcaccgtggtgggcaagctcgaaggcgaccgcgcttccactctgggctggatcgac
ctgctgcgcgaatcgtatgtgccggaagaccgcagccgcggcatctttttcgatcaagac
tggggctccatgcccggcgccttcgccgtagcctccggtggcattcacgtgtggcacatg
cccgcgctggtgaccatcttcggcgatgattccgtgctgcagttcggcggcggcaccctc
ggccacccctggggcaacgcggccggcgccgcagccaaccgcgtggcgctcgaagcctgc
gtgcaagcccgcaatgaaggtcgtcaggttgaaaaggaaggtcgcgagattctcaccgca
gccgcccagcattcgcccgaactgaaaatcgccatggaaacctggaaagaaatcaagttc
gagttcgacaccgtcgacaagctggacgtcaccaacaagtga
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