Thermoanaerobacter kivui: TKV_c12350
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Entry
TKV_c12350 CDS
T03397
Symbol
dacF
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacF
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
tki
Thermoanaerobacter kivui
Pathway
tki00550
Peptidoglycan biosynthesis
tki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tki00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TKV_c12350 (dacF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tki01002
]
TKV_c12350 (dacF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tki01011
]
TKV_c12350 (dacF)
Enzymes [BR:
tki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TKV_c12350 (dacF)
Peptidases and inhibitors [BR:
tki01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
TKV_c12350 (dacF)
Peptidoglycan biosynthesis and degradation proteins [BR:
tki01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
TKV_c12350 (dacF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AIS52406
UniProt:
A0A097ARE9
LinkDB
All DBs
Position
1181026..1182168
Genome browser
AA seq
380 aa
AA seq
DB search
MFKRALIVVLTLIIMSSFVFNNSVYADNLNLKSKSAILIDANTGQILYEKDSHKILPPAS
VTKVMTLLLAIEAIDSGKIKITDKVVTSKHAYDMGGTQIYLEIGEEMTVDDLMKAIAMNS
ANDASVALAEYIAGTEENFVEMMNKRAKELGAKNTNFKNASGLPEEGHVTTVYDMAMISR
ELVKHQSIFKYLTNKLDSLRGGKFSLINTNKLLWRYKGADGIKTGSTSEALYCLTATAKR
GDTRLIAVVFGAPDSETRFNETAKLLDYGFANYETLKVASKGQVFGNVRVLKGKQDTIAA
ISQQEEYVLIRKGESKNIKTEINLNKFIQAPVNKDKKIGTVKVLQDGKVIKTFDLYPQQE
VLRSNLLENCKKIFKEWLKK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagggcgttaattgtagtacttaccttgataataatgagttcttttgttttt
aataacagcgtttatgctgataacttaaatttaaaatctaagtctgctattttaatagat
gctaatacaggacaaattttgtatgaaaaagatagccacaaaattttgcctcctgccagt
gtgacaaaagtaatgactcttttgttggccattgaagcaatagattccggaaaaatcaaa
ataactgacaaggttgtaacaagcaagcacgcttatgacatgggaggcactcaaatatac
ttagaaataggagaagagatgacagtagatgatttgatgaaagcgatagctatgaattct
gccaatgatgcatcagttgcattagcagagtatatcgcaggtacagaggaaaactttgtg
gagatgatgaataaaagggcaaaagagctgggagctaaaaacacaaactttaaaaatgct
tcaggactacccgaggaaggtcatgtaacgactgtttatgatatggccatgatttccaga
gagttagtaaaacaccaaagtatttttaaatatttgaccaataaattggattctttaaga
ggaggaaaatttagccttataaatacaaataaattgttgtggcgctataaaggagctgat
ggcattaaaacaggttctacttcagaagctttgtattgtctcacagcaacggcaaaacgc
ggagatacgcggttaatagctgtggtttttggcgcacctgattctgagacaagatttaac
gaaacagcaaaactattagattacggatttgcaaattatgaaactttaaaagtagcttct
aaaggacaggtatttgggaatgtcagagtgttaaaaggcaaacaagatactattgctgct
atatcacagcaagaagaatatgtgctgattagaaaaggagaaagcaaaaacataaagact
gagataaatttgaataaatttatacaagctcctgtaaacaaagataaaaaaattggaaca
gtgaaagtgttacaagacggaaaagtgataaaaacctttgatttatatcctcaacaagaa
gtgttaaggtctaatcttttggaaaattgtaaaaaaatatttaaagagtggctaaaaaaa
tag
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