Thiothrix litoralis: J9253_08025
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Entry
J9253_08025 CDS
T07754
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
tlo
Thiothrix litoralis
Pathway
tlo00020
Citrate cycle (TCA cycle)
tlo00190
Oxidative phosphorylation
tlo00650
Butanoate metabolism
tlo01100
Metabolic pathways
tlo01110
Biosynthesis of secondary metabolites
tlo01120
Microbial metabolism in diverse environments
tlo01200
Carbon metabolism
Module
tlo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tlo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tlo_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J9253_08025
00650 Butanoate metabolism
J9253_08025
09102 Energy metabolism
00190 Oxidative phosphorylation
J9253_08025
Enzymes [BR:
tlo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
J9253_08025
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
Thi4
DUF1487
Motif
Other DBs
NCBI-ProteinID:
QTR47853
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Position
1652236..1654023
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AA seq
595 aa
AA seq
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MTEYKIEHHTYDVVVVGAGGAGLRATFGMAVKGLSTACITKVFPTRSHTVAAQGGMSAAL
GNMGPDKWQWHMYDTVKGSDWLGDQDAIEYMCREAIPAVIELEHQGVPFSRTEEGRIYQR
PFGGMTTEFGKGIAHRTCAAADRTGHAILHTLYQQSLRHDAVFFIEHFATDLIMDEEGVC
RGVLAWDLANGVLRIFRAQKVVLATGGYGRAYFSATSAHTCTGDGNGMVTRAGLPLQDME
FTQFHPTGIYGSGCLITEGVRGEGGYLTNSQGERFMERYAPNAKDLASRDVVSRAMTIEI
NEGRGVGKETDHIHLHLEHLGPEVIHERLPGIAESARIFAGVDVTKEPIPVLPTVHYNMG
GIPTNYHGEVVTLKDGEPDSVVPGLMAIGECACVSVHGANRLGSNSLLDIVVFGRAAANR
CAETLTAGATQQELPESGVQKALDRFKRIHTADGSKSTADIRDAMQRTMQKHAAVFRTGE
SMQEGVAKMNEIYASFNDVAVKDRGLVWNSDLMETFELANLLDCAQTSINCALNREESRG
AHAREDFPERDDAGWMKHSISWVDEAGKVSIDYRPVHTYTLTDEIEYIAPKKRVY
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgactgagtacaaaattgaacatcacacctacgatgtcgtggtcgtgggtgcgggtggt
gcgggcttgcgtgccaccttcgggatggcggtaaaaggcttatcaacagcctgtattacc
aaagtattcccaacgcgtagccataccgtcgcagcacaaggcggcatgtccgccgcgctc
ggcaatatggggccggataaatggcaatggcatatgtacgacaccgtaaaaggctcggac
tggctgggcgaccaagatgccatcgaatacatgtgccgcgaagcgattccggcggtcatc
gaactggaacatcagggcgtgccgttttcgcgtactgaggaaggccgtatttaccaacgt
ccgtttggcggcatgaccactgaattcggcaaaggcattgctcaccgtacttgcgcggcg
gctgaccgtaccgggcacgcgattttgcataccctgtaccagcaatcgctgcgtcacgat
gcggtattcttcatcgagcatttcgcgaccgacctgatcatggatgaggaaggcgtctgc
cgtggggtactggcgtgggatctggcgaatggtgtcctgcgtatcttccgtgcgcaaaaa
gtcgtactggcaaccggcggttacggtcgtgcctacttctctgctacctcagcacacacc
tgtacgggtgacggtaacggcatggtaacccgcgctggcctgcccttacaggacatggaa
ttcacccagttccacccaaccggtatctacggctccggttgtttgatcactgaaggcgtg
cgcggtgaaggtggctacctgaccaattcccaaggcgaacgtttcatggaacgttacgca
ccgaatgccaaagaccttgcctcacgtgacgtagtaagccgcgccatgaccatcgaaatc
aacgaaggccggggcgtgggcaaggaaaccgaccacatccacttgcacctggaacattta
gggccggaagttatccacgaacgcctgccgggtatcgccgaaagtgcgcgtatctttgct
ggcgttgatgtcaccaaagagccaatcccagtattgccgacagtgcattacaatatgggc
ggcatccccaccaattatcacggcgaagtcgtgaccctgaaagatggcgaaccggattct
gtggttcccggcctgatggcgattggtgaatgtgcttgcgtatcggttcacggcgcgaac
cgtctgggttccaactccttgctggacatcgtggtcttcgggcgtgcagcagccaaccgt
tgcgctgaaaccttgaccgcaggcgcaactcagcaagaattgcctgaatctggcgtacaa
aaagccctcgaccgtttcaagcgcatccacactgctgacggcagcaaatccaccgccgac
atccgcgatgctatgcagcgcaccatgcaaaaacacgcagcggtcttccgtaccggcgag
tccatgcaagaaggtgtcgcgaaaatgaatgagatttacgccagcttcaacgatgttgcc
gtcaaggatcgtggtctggtgtggaattccgacctgatggaaaccttcgagcttgccaac
ctgttggattgcgcccagacctccatcaattgcgccctcaaccgcgaagaaagccgtggt
gctcatgcccgtgaagacttcccggaacgcgatgatgctggctggatgaaacactccatc
tcttgggtggatgaagctggcaaagtctccatcgactatcgccccgtccacacgtacacg
ttgacggatgaaatcgaatacatcgcgccgaagaaacgggtctactaa
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