Thioflavicoccus mobilis: Thimo_0920
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Entry
Thimo_0920 CDS
T02397
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb00500
Starch and sucrose metabolism
tmb01100
Metabolic pathways
tmb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Thimo_0920
Enzymes [BR:
tmb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Thimo_0920
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
AGA89750
UniProt:
L0GWK5
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All DBs
Position
complement(997478..999556)
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AA seq
692 aa
AA seq
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MPPRTYSTSPGTWNQAGAVFLPEGVNFCVFSRHATSVELLLFEGDDSPEPFQIIALDPAI
HRTFFFWHVLVEGLPDGTYYCWRAAGPNDTQLTGCRFDPGKALLDPWATTVSSRLWDRAK
ACGEGDNVATAMRAQAVRDRYAWGGDQPLHIPLQDAVIYEMHLGGFTRDPSSGVHHPGTF
FGLIEKIPYLRSLGITHVELMPLMAFDAQDVPPQTAALGLENYWGYSTHSFFAPHPTYSV
VPSRARDECREMIKALHDAGIGVILDVVFNHSAEGGAEGPTINFKGLSNETFYHLDVLDK
RRYRDYTGCGNTINCNHPIVTRYLLDCLSYWVRAMHVDGFRFDLASALARGEDGTPQYHA
PILWSTELTPALAETHLIAEAWDATGLYQVGDFPGFRWAEWNGRYRDLIRAFVRGDKGLV
SEVATRIAGSSDLYEHRGRLPCNSINFVTCHDGFSLHDLVSYDGKHNEANGEDNRDGHDY
NLSWNCGAEGPTDDPAVNTLRRRQAMNLIAILMLSQGVPMLLSGDEVLRSKAGNNNTYCQ
NNRLSWLDWGLIERNHEMLDFVRAMVALRHRHANLRRTRFLTGQPAEGLSLPDIRWHGQE
LDNPLWDDPEAQTLAFTLAGTTPDEGPLHVMLNMSTDQVDFAVPPLPGYRWHLAFDTLRQ
ALPRAFEAQERFDDVRYGVGPHSIVLLEGHPT
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgcgtacctattcgaccagccccggcacctggaatcaggccggggccgtcttc
ctgccggagggcgtcaacttctgcgtcttctctcgccacgccaccagcgtggagttgctg
ctcttcgaaggcgacgacagccccgagccgttccagatcatcgcgctcgatccggccatc
caccgcaccttcttcttctggcacgtgctggtcgaggggctgcccgacggtacctattac
tgctggcgcgccgccgggccgaacgatacccaactcaccggttgccgattcgatcccggc
aaggccctcctcgacccctgggcgaccacggtcagcagccgcctatgggatcgcgccaag
gcctgcggcgagggcgacaatgtcgccacggcgatgcgcgcccaggccgtgcgcgaccgc
tacgcctggggcggcgatcagcccctgcacatcccgctgcaagacgcggtcatctacgag
atgcacctcggcggcttcacccgcgacccgagctcgggtgtccaccaccccggtaccttc
ttcggcctgatcgaaaagatcccctacctgcgctcgctcggtatcacccatgtcgagctg
atgccgctgatggccttcgatgcgcaggatgtgccaccgcaaaccgcggccctcggcctg
gagaactactggggctacagcacccatagcttcttcgccccgcacccaacttacagcgtc
gtcccatcgcgggcgcgcgacgaatgccgcgagatgatcaaggccctgcacgacgccggc
atcggggtcatcctcgatgtggtgttcaaccactcggccgagggtggcgccgagggcccg
acgatcaacttcaagggcctgagcaacgagaccttctatcacctcgacgtcctcgacaag
cgccgctaccgcgactacacgggctgcggcaacaccatcaactgcaatcacccgatcgtc
acccgctacctcctcgactgcctgagctactgggtacgggccatgcacgtcgacggcttc
cgcttcgatctggccagtgcgctcgcccgcggcgaggacggcaccccgcaataccacgcc
ccgatcctctggagcaccgaactcaccccggcgctcgccgagacccacctgatcgccgag
gcctgggacgcaaccggcctgtatcaggtcggtgacttcccgggcttccgctgggccgaa
tggaacggtcgctaccgcgacctgatccgcgccttcgtgcgcggcgacaaggggctcgtc
tcagaggtcgcaacccgcatcgccggcagcagcgatctctacgagcaccgcggccgccta
ccctgcaactcgatcaatttcgtcacctgccacgacggcttcagcctccacgacctggtc
agctatgacggcaagcacaacgaggccaacggcgaggacaaccgggatggccatgactac
aacctgagctggaactgcggtgccgaaggtcccaccgacgacccggcggtcaacacgctg
agacgccgccaggcgatgaatctgatcgcgatcctgatgctgagccagggggtaccgatg
ctgctcagcggcgacgaggtgctgcgatccaaggccggcaacaacaacacctactgccag
aacaaccgcttgtcgtggctcgactgggggctcatcgagcgcaatcacgagatgctcgat
ttcgtgcgcgcgatggtcgcactgcgccaccgccacgccaacctgcggcgcacccgtttc
ctgacggggcagccggccgagggactgtcgctgcccgacatccgctggcatggccaggaa
ctcgacaaccccctctgggacgacccagaggcacaaacgctggccttcaccctcgccggc
acgacgcccgatgagggaccgctgcatgtgatgctgaacatgtccaccgaccaggtggac
ttcgccgtgccgccgctgcccggctaccgatggcacctcgccttcgacacgctacgacag
gcgctgccccgggcgttcgaagcgcaggagcgattcgacgacgtgcgctacggcgtcggc
ccgcacagcatcgtcctgctcgagggtcacccgacctga
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