Thioflavicoccus mobilis: Thimo_3108
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Entry
Thimo_3108 CDS
T02397
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb00470
D-Amino acid metabolism
tmb00550
Peptidoglycan biosynthesis
tmb01100
Metabolic pathways
tmb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Thimo_3108
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Thimo_3108
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Thimo_3108
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tmb01011
]
Thimo_3108
Enzymes [BR:
tmb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Thimo_3108
Peptidoglycan biosynthesis and degradation proteins [BR:
tmb01011
]
Precursor biosynthesis
Amino acid ligase
Thimo_3108
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
TTL
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AGA91792
UniProt:
L0H155
LinkDB
All DBs
Position
complement(3407939..3408862)
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AA seq
307 aa
AA seq
DB search
MTQDPAKFGKVAVLLGGRSAEREISLKSGSAVLAALRERGVEAQPLDPGPDVLERLREGG
VERAFIALHGRGGEDGRIQGALETLGLPYTGSGVLGSALGMDKYRCKLLWRGLGLPTADF
VLLRGQADLVAAADLGFPLMIKPVHEGSSIGMARVEDREALAQAWRTASGFDALVLAERW
IEGAEYTCAVLGHEALPLIRLETPRMFYDYEAKYQAETTRYLCPCGLPGADEAALRRLAL
EAFDAVGASGWGRVDLMVDGQGQPLLLEINTIPGMTDHSLVPMAARAQGLSFADLVWRIL
ETTLGDG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggatccggcgaaattcggcaaggtggcggtgttgctcggcgggcgttcggcc
gagcgcgagatctcgctgaagagtggctcggcggtgctcgctgcgttgcgcgagcgcggc
gtcgaagcgcaaccgctcgacccgggtcccgatgtcctggagcggctgcgcgaggggggg
gtcgagcgcgccttcatcgcgttgcatggccgtggcggcgaggacggtcggatccagggt
gccctggagacgcttggtctgccctacacgggttcgggggtgctgggctcggccctcggc
atggacaagtatcgctgcaagctcctgtggcgtggtctggggttgccgacggcggatttc
gtcctgctgcgcggccaggccgacttggtggctgccgccgacctcggtttcccgctgatg
atcaagccggtccatgagggttcgagcatcggcatggcccgggtcgaggaccgcgaggcc
ctggcgcaggcctggcggacggcgtcgggcttcgatgccctggtcctcgccgaacgctgg
atcgaaggggccgagtacacctgtgcggtcctcgggcacgaggccttgccgctgatccgc
ctagagacgccgcggatgttctatgactacgaggccaagtatcaggccgagacgacccgc
tacctctgcccgtgcgggttgcccggcgcggacgaggcggcgctgcggcggctcgcgctt
gaggccttcgatgcggttggcgcaagcggctgggggcgtgtcgacctgatggtcgacggc
cagggtcagccgttgttgctggagatcaacacgattccgggtatgaccgaccacagcctg
gtgccgatggcggctcgggcccaagggctatcgttcgccgatttggtatggcgcatcctg
gagacgacgctcggcgatggctaa
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