KEGG   Tatlockia micdadei: LMI_2571Help
Entry
LMI_2571          CDS       T03810                                 

Gene name
ligD
Definition
(GenBank) DNA ligase D
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
tmc  Tatlockia micdadei
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tmc00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    LMI_2571 (ligD)
Enzymes [BR:tmc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LMI_2571 (ligD)
DNA repair and recombination proteins [BR:tmc03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     LMI_2571 (ligD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
I:complement(2690528..2692996)
Genome map
AA seq 822 aa AA seqDB search
MSLESYRQKRDFKKTPEPKGHVHKTKHFLFVVQKHAATHLHYDFRLELKGVLKSWAVPKG
PCLDPKVKRLAIHVEDHPIEYGTFEGIIPKEEYGGGTVMLWDQGHWVPLDDDPEEAYHQG
HLRFELNGKKIQGRWDLIRFKQNQWFLIKYDDEFAKSFSEYDVTKEEPRSVLNDQSIEEI
SRNYQGVWSKNKANPRADFIDPELKASLQTSPFLKTISAQLATLVDKPPKGDNWLHEIKF
DGYRMVAFKKGDKIRFVSRNQKDWTTEFHQLIPDLQKLPVENGIFDGEIVALDERSRSNF
QLLQNSIKSEKQSSLFYYIFDLLYLEQYDLRSLPLIERKKILTTILEEAPLSIKYSDHVV
GQGEAMFKHSCDFALEGIVSKRADSRYLGKRSKSWLKIKCSKRQEFVVGGFTKPKGSRKH
FGSLYLGVFNEDKELVFIGNVGTGFTDKSLEEIYNELKPLEIKKNPFNEFPPEAKTATWV
KPKLIVEVEFSEWTDEGRLRHPSFKGLRTDKKAQEVIKEKERSLESIESEPPAMMGNPQK
LSSPEKILYKEDKISKQDLYDYYDKISDYILPYILNRPLTLVRCPNNYKECFYQKHLNKG
LTKLHEVPVKNKKGEVEQYLYLDNKEGLLNLVQMGVLEIHPWGSTINHLEHPDILIFDLD
PAPDVEWKMVVEAAFDIREQLQQYELTSFVKTTGGKGLHIVIPVKAEYDWDEVKNFTRVF
VEFLEKRNPEKYISKMTKAKRKGKIFIDYLRNQRDATAIAPYSTRARIHAPIATPIRWDE
LSEQYEDTFYTIRTVLKRLQALKTDPWRGFWTLSQSLRLNEL
NT seq 2469 nt NT seq  +upstreamnt  +downstreamnt
atgagcctagagagctatcgacaaaaaagggattttaaaaaaacgccagagcccaaaggg
catgtgcataaaaccaaacattttctttttgttgttcaaaaacatgctgcaacccacctt
cattatgattttcgtttagagcttaaaggcgtccttaaaagttgggctgtacctaaaggg
ccttgtcttgaccctaaggtaaagcggctcgcaatccatgttgaagatcatcctattgaa
tatggcacttttgaagggattattcctaaagaggagtatggaggaggaacagtaatgctt
tgggatcaagggcattgggttccgctggatgatgatccggaagaggcctatcaccaaggc
catcttcgttttgaactcaacggtaaaaaaatacaagggcgttgggatctaattcgtttt
aaacaaaatcaatggttcctcattaaatatgatgatgaatttgccaagtccttctcagag
tatgatgttacgaaagaagaaccccgaagtgttctaaatgatcaatcaatagaggagatt
agccgcaattaccagggtgtttggagtaaaaataaagccaacccgagggctgattttatt
gatcctgaattaaaagcaagtttacagactagcccttttcttaaaacaatttctgcacaa
ttggccactttggttgacaaaccacctaaaggggataattggcttcatgagattaaattt
gatggttaccgcatggttgcatttaaaaaaggagacaagattcgatttgtttcccgcaat
caaaaggattggacaacggagtttcaccagctcattcctgatttgcaaaaattgccagta
gaaaatggtatttttgatggcgaaattgtcgctttagacgaaaggagccgctctaatttt
caattattgcaaaactcaataaaatcagaaaaacaatcttctcttttttattatattttt
gatctgttataccttgaacaatatgatcttcgttcattaccccttatcgagcgaaaaaaa
atattaaccacaatactcgaagaagccccattgtccattaaatacagtgatcatgttgtt
ggtcaaggcgaagccatgtttaaacactcatgcgattttgctctggaagggattgtgtct
aagcgggccgatagtcgatacctagggaagcgtagtaaatcttggcttaagattaaatgt
tctaagcgacaggaatttgtggttggcggatttacaaaaccaaagggttctcgaaaacat
tttggttcgctttatttaggtgtttttaatgaagataaggagttagtgtttattgggaat
gtcgggacaggatttactgataaatcactagaagaaatttacaatgaactcaaaccgctt
gaaattaaaaaaaaccctttcaatgaattcccgcctgaagcgaaaacagcaacttgggta
aaaccgaaattgattgttgaagtagagttttcagaatggaccgacgaaggaagactaagg
catcctagctttaaaggacttcgcacggataagaaagcgcaagaggttattaaagaaaaa
gaacgctcgttggaatcaatcgaatcagagccacctgctatgatgggtaatcctcagaaa
ttgtccagtcccgaaaaaattctttataaggaagataaaattagcaaacaagatctttat
gattattacgataaaattagtgattatattctgccgtacatccttaatcggcctttaact
ttagtacgttgtcctaataactataaagaatgtttttatcaaaaacaccttaataaagga
ttgacaaaattacatgaagttcctgttaaaaataaaaaaggtgaagtcgaacaatactta
tacttggataacaaagaaggattgctaaatttagtgcaaatgggcgttttagagattcac
ccttggggaagcacgattaaccatcttgagcatcctgatattttgatttttgatttagat
cccgctcctgatgtggaatggaaaatggtagttgaggcagcttttgatattagagagcag
ttacagcagtatgaattaacctcttttgttaaaacaacaggtggaaaagggcttcatatc
gttatacccgttaaagcagaatatgactgggatgaagtaaagaactttacccgtgttttt
gttgaatttttagaaaaaagaaatcctgaaaaatacatcagtaaaatgacaaaagctaag
cggaagggaaaaatttttattgattatctgcgcaatcagcgtgacgccacagcaatcgca
ccttattcaactcgtgccagaattcatgcccccatcgctacgcccattcggtgggatgaa
cttagtgaacaatatgaagacacattttatacgatccgtactgtattaaagcgtttacaa
gcgttaaaaaccgatccgtggagagggttttggactctatcccaatctttaagattgaat
gaattgtga

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