Talaromyces marneffei: EYB26_005985
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Entry
EYB26_005985 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EYB26_005985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmf03041
]
EYB26_005985
Enzymes [BR:
tmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EYB26_005985
Spliceosome [BR:
tmf03041
]
Complex C
Other components
Step II factors
EYB26_005985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
DEAD
HA2_N
AAA_22
AAA_30
AAA_19
SLFN-g3_helicase
T2SSE
nSTAND3
Flavi_DEAD
AAA_16
SRP54
ATPase
Motif
Other DBs
NCBI-GeneID:
79165958
NCBI-ProteinID:
XP_054121237
LinkDB
All DBs
Position
4:join(2612248..2615754,2615812..2615988)
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AA seq
1227 aa
AA seq
DB search
MDDLESLELFSLVSRVTTELQNHLGINDKTLAEFVIDQHLKSKSFADFKNDLDALGAEFP
PSLIESIDRMVVTMHPKYKSKRGIDSGTNGADDDMEALNAVGKKARIFKGLAIPDKVQTW
DDDEPATTKNVTEDDARTGAMDDTFAMLEGLAGKSREDRHEPSQAAKPSRKRSRSPDYGD
YDSTSYRRNRDRRRSTSRSPSPEYREKHKNGVDRDRYDRKERRNGHRDKHERRSRRDQDD
DDYFRRPPTPEIDDQPVLYKTYDGRVTGVKDFGAFVNLQGVRGKVDGLVHVSAMQEGARV
NHPSDLVSRGQLVKVKVVSIQGTRIGLSMKEVDQVTGRDLIPEKRLASGANMERLAGTDA
KDRYGNLDSDVPVVEGDFGKKFKNKKRLTSPERWEIKQLIASGAASAADYPDIDEEYHAT
LAGEGEFEQEEDIDIEVRDEEPPFLAGTTKKSLELSPIRVVKAPDGSLNRAAMAGTSLIK
ERRELKQQEAAEKAAEQANDIDLSAQWLDPMADPDQRQFASDIRKGGDKPDAAMPEWKVA
TQGRNVSMGKRTNLSIKEQRESLPVFQFRQQLLDAVRDNQLLIVVGETGSGKTTQLTQYL
VESGYGNNGMVGCTQPRRVAAMSVAKRVAEEVNCKLGEEVGYTIRFEDCTSPKTRIKYMT
DGMLQREILLDPDVKRYSVIILDEAHERTISTDILFGLLKKTLKRRPDLKLIVTSATLDA
DKFSEYFNGCPIFSIPGRTFPVEVLYSREPESDYMAAALDTVMQIHLTEPPGDILVFLTG
QEEIDTSCEVLYERMKALGPSVPELIILPVYSALPTEMQSRIFEPAPPGGRKVVIATNIA
ETSITIDGIYYVVDPGFSKQVAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRL
YTEAAYESEMLPTSIPEIQRTNLAHTILMLKAMGINDLLTFDFMSPPPVATMLSAMEELY
ALSALDDEGLLTRLGRKMADFPMEPSLAKVLLASADMGCSDEILTIVAMLSVQTVFYRPK
EKQQQADQKKAKFHDPHGDHLTLLNVYNAWKQSNYNNAWCFENFIQARSMRRAQDVRKQL
VGIMDRYRHKIISCGRDTNRVRLALCTGFFRNAARKDPQEGYKTLIEGTPVYLHPNSALF
GKAAEHVIYHTLVLTTKEYMHCVTTIDPRWLVEAAPTFFKVAPTDRLSKRKKAERIQPLH
NRFAGQDDWRLSAQRRQGRGGGGGTWG
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctcgaatccctcgagctcttctcgctggtctcgcgagtgaccaccgaactc
cagaaccatctcggcatcaacgacaaaacactcgcggagtttgtgatcgatcagcacctc
aaatccaagtcgttcgcggacttcaagaatgatctcgatgcgctcggggcggagtttccg
cctagtttgattgaatcaattgatcgaatggtggtcacgatgcatcctaaatataagtca
aagagaggaattgattctggtaccaatggcgccgacgatgatatggaagctttgaatgct
gttgggaaaaaagcgaggatattcaagggacttgcgatacctgataaagttcagacttgg
gatgatgatgaaccggcaactaccaaaaatgttacggaggacgatgcgcgaacgggtgct
atggatgatacatttgcgatgctggaaggtcttgctggcaagtcgagagaggaccgtcac
gagccgtcacaagctgcaaaaccaagcaggaaacgcagccgaagtccagattatggagac
tacgactctacgagctatcgacgaaatagagataggcgcaggtccacctctcggtctcct
agccccgaatatcgagaaaaacataagaatggcgtggatagagaccgatacgatagaaag
gaaagacgaaacggtcaccgagataaacatgaacgccggtcaagacgggatcaggatgat
gatgactatttccgtcgaccaccaactccggaaatcgacgatcaacccgtcctttacaaa
acctacgatggtcgcgtgactggtgtcaaagacttcggcgcctttgtgaatttacagggt
gttcgagggaaggttgatggactcgtgcatgtttcggccatgcaagaaggagcccgagtc
aatcatccttctgacctcgtctcgcgcggtcaattagtgaaggtcaaggttgtcagcata
cagggtactaggatcggactttcgatgaaagaggttgatcaggtcacaggccgagacttg
attcctgaaaagcggcttgcttccggtgctaatatggagagactggctgggactgatgcc
aaggaccgctatggcaatcttgattccgatgttcctgttgtcgaaggagacttcggcaag
aagttcaaaaataaaaagaggcttacatcgccggaacgatgggagattaagcagcttatt
gcctccggagctgcgtcggcagctgactatcctgatattgatgaagagtatcatgcaact
ttagccggcgaaggcgaatttgaacaagaagaagatattgatatcgaagttcgtgacgag
gaaccgcctttccttgccggtactactaaaaaatcccttgaactctcaccaatccgcgtt
gttaaggcacccgatggatcattgaatcgtgctgctatggccggtaccagcctgataaaa
gaacgtcgagaattgaagcagcaagaagcggcagagaaggcggcagagcaggcaaatgat
atcgatctgtcagctcaatggctggatccaatggctgaccctgatcagagacagttcgcc
tcagatattcgcaaaggtggtgataaaccagatgctgctatgccagaatggaaggtggca
acccagggcagaaatgtctcaatggggaagcggacaaacctcagcatcaaggagcaacgg
gagagcctaccagtcttccaatttcgacaacaactacttgatgctgtgcgagataatcaa
ttgttaatcgtcgttggagaaaccggttctggcaaaacaacccaactgactcagtatttg
gtcgagagtggatatggcaataacggcatggtaggatgcactcaaccgcgacgagtggct
gctatgtcggttgcaaaacgtgttgcagaagaagtgaattgcaaactgggtgaagaggtc
ggttacaccatccgtttcgaagactgcacaagcccgaagacccgaatcaaatacatgacg
gacggaatgttacaaagggagattctgcttgacccggatgtcaaacgatactctgtcatc
attttggacgaggctcatgagcgcactatatccacggatattttgtttgggctgttgaaa
aagactttaaaacgtcgtccagacttgaaactcatcgtgacttcagccacacttgatgcg
gacaaattttcagaatacttcaacgggtgccctatcttctcaatccctggtcgcacattt
cctgtcgaagttctctatagtagagaaccagaaagcgattatatggctgcggccctcgat
acagtcatgcaaattcatcttacggaaccccctggtgatatcctagttttcttgacagga
caggaggaaatcgacactagttgcgaggtcctatatgaaagaatgaaagctctgggtcct
agcgttcctgaacttatcattttgccagtatatagtgccctacctacagagatgcaaagc
agaattttcgagccggcacctccgggtgggcgaaaagtggttattgctaccaatattgcc
gagacgtctatcacaattgatgggatctattacgttgttgacccgggattctcgaaacaa
gttgcctatgacccgaaattaggtatggattctttggttgttacgcctatctctcaagct
caagcaaagcaacgagctggacgagcgggaagaacgggtcctggtaaatgcttcagactg
tatactgaggcagcgtacgagtcagaaatgcttccgacatctattcctgaaattcaacgt
accaatctggcacacacgattctcatgctcaaagcaatgggcatcaatgatttgttaacg
ttcgatttcatgtcgccaccaccagtcgctactatgctcagtgctatggaagagttgtac
gcattgtcggctcttgacgatgagggtcttttaacacgtttgggccggaaaatggcggac
ttccccatggagcctagtctggcaaaagtactccttgcttctgctgatatgggatgttcg
gatgagatattgaccattgttgcaatgctttctgtccaaacagttttttacaggccgaag
gaaaaacaacaacaggccgaccagaagaaagccaagttccatgatcctcatggtgaccat
ctcacattgctgaatgtgtacaatgcttggaagcaatctaactataataatgcttggtgc
tttgagaattttatacaagctcgatcgatgcgtcgtgctcaagatgttcgaaagcagctt
gttggtattatggatcggtatcggcataagatcatctcctgcggacgtgatacaaacaga
gtacgactcgctctttgcacgggatttttccgcaacgctgcccgcaaagaccctcaggaa
ggttacaagacgcttatcgaaggtactcctgtgtatcttcaccctaattcagctcttttc
ggaaaggcagcagagcatgttatctaccacactctggttcttacgacaaaagaatacatg
cattgtgttaccaccatagacccacgatggctggtggaagcagcaccaacgttcttcaag
gtggcgccgacggatcgcctctcgaaacgaaagaaagccgagcgaattcaacctttacac
aaccgatttgcgggccaagacgattggcgtttatcagcacaacgaagacagggccgcgga
ggtggtggaggaacatggggttga
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integrated database retrieval system
