Tuber melanosporum: GSTUM_00005992001 Help Entry GSTUM_00005992001 CDS       T01282                                  Name (RefSeq) hypothetical protein   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism tml  Tuber melanosporum Pathway tml03030   DNA replication tml03410   Base excision repair tml03420   Nucleotide excision repair tml03430   Mismatch repair Brite KEGG Orthology (KO) [BR:tml00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     GSTUM_00005992001    03410 Base excision repair     GSTUM_00005992001    03420 Nucleotide excision repair     GSTUM_00005992001    03430 Mismatch repair     GSTUM_00005992001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tml03032]     GSTUM_00005992001    03400 DNA repair and recombination proteins [BR:tml03400]     GSTUM_00005992001 Enzymes [BR:tml01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      GSTUM_00005992001     6.5.1.6  DNA ligase (ATP or NAD+)      GSTUM_00005992001     6.5.1.7  DNA ligase (ATP, ADP or GTP)      GSTUM_00005992001 DNA replication proteins [BR:tml03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     GSTUM_00005992001  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      GSTUM_00005992001 DNA repair and recombination proteins [BR:tml03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      GSTUM_00005992001    NER (nucleotide excision repair)     Other NER factors      GSTUM_00005992001    MMR (mismatch excision repair)     Other MMR factors      GSTUM_00005992001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  9187931 NCBI-ProteinID:  XP_002838121 INRA:  GSTUM_00005992001 UniProt:  D5GCR9 LinkDB All DBs AA seq 976 aa AA seqDB search MSSSKKQTTLGYVKSQTTLGRFFSLPAGTNPATPIQSKLKTISKPGKAADTDDVASPKVR KTSARGQARKKPTIPEDDGSDGGAGYTKAGVSFSETEMSDASEPAIGSSKQKALGNSSTK RERPAARKCGIKPSNIKKETETSEDEAPPSKRSKSAPTTKPLKKDCDESELSDEDIAPRK RLPIINSPKATAKKRKGKVVGKAVDVNTPVSPSGTTKGARSSPISSPVVSPQESGESEPP LPESPSSTPKISKSKSGSKAKVAKKSPSDKRSKKRGAASDTEAVDKPESSATHKALDSDS GTEKPSLAPAAGREMIKKLSKSVPPAYPDWVAGEPTPYAALVTTFNLLESTTKRLEKISH TSRFLRQVLQLSPDELLLVIHLMINKLAADFEGVEMGIGESLLMKAIGESCGRSLERIRE DQRECGDLGLVAMKSRNNQKTLFAPRPLTIAVVHKGLLGIAKTKGEGGQGRKVSAIRKLL AAAKGDEAKFLIRGLEGKLRLGLAERTVLVSLSSAMITHEQELVGKTPTTAMLDQSELNL RSVYSELPSYEIIIPAMREHGIMDIKKYCKLQPGVPVKPMLAKPTKAISEVLDRFENKRF TCEYKYDGERAQIHYVSPKSSIEYPPATLSGEPIKNLAKVFSRNSEDLSGKYPDILAAMN EWVRPEVESFVLDCEAVGWDETNNRLLPFQMLQTRKKKDVALEDVKIRVCVHAFDLLFLN GKPVVRESLDDRRKLMHKTFIEVPNQFVFARYMDSSHLEEIRLFLDQSVKDSCEGLMVKM MDGPESFYEPSQRSRNWLKIKKDYIDELGDSLDLVVIGAYWGRGKRTSVYGSFLLACYNP GTQNYESLCNIGTGFTEAELEEFYGTLHPLEIDRAKPFYDHPSGNAGKPDVWFEPKVLWE VKAADLTLSPRYKAAAGLAGHPDKGVSLRFPRFIGPRTDKTGEDATSSSQIAEMYLRQDQ VAHKTGAKGVDDDFEY NT seq 2931 nt NT seq  +upstreamnt  +downstreamnt atgtcgtcaagcaaaaaacaaacgactctggggtatgtaaagtctcagacgaccttagga cggttctttagcctcccagccggcaccaatccggccactcccattcaatcgaagctcaag acaatcagtaagcctggcaaagccgccgataccgacgatgtggcttctcctaaggttagg aagacctctgccagaggccaggctcggaagaaacctacaattccggaggatgacggatcc gatggcggtgcagggtatacgaaggccggtgttagcttttcggaaacggagatgtctgat gcttcagagccagcgatcggttcgagcaagcagaaagctctagggaattcctcgacgaag agagagagacctgctgctcggaagtgcggtattaaaccttcaaatatcaagaaggagaca gaaacttctgaagacgaggcgcctcctagcaaacgttctaaaagtgctcccactaccaaa ccgctcaaaaaggattgcgatgagtccgaattgtcagatgaagacatcgcacccagaaag cgtttgccgatcatcaattctccaaaggcgactgccaaaaaaaggaaaggcaaagttgtg ggaaaggccgtcgatgtgaatacgcctgtttcgccttctggaactacaaagggtgccagg tcctcgcctatttcttcaccggttgtctctcctcaggagtcgggagagtctgagccgccc cttccagaatctccttcaagcacacctaagatatctaaatctaagtctgggtctaaggct aaagttgctaaaaagtcgccttctgataagagatctaaaaagagaggggccgcttcggac actgaagctgtggataagcctgaaagctctgcgacacacaaggcattagattcagacagt gggactgagaagccttcacttgcacctgcggcaggccgcgagatgattaaaaaattatct aaatccgttcctccagcatatcccgattgggttgctggtgagccgaccccctatgcggcc ttagtaacaacctttaatctcctggagtcaacgaccaaacgtcttgagaaaatctcgcat acatctcgattcctgaggcaggttcttcagctttctcctgatgagcttttactggtaatt cacttgatgatcaacaaacttgccgctgatttcgagggtgtcgaaatgggtattggcgag agtttgctcatgaaagctattggtgagagttgtggtaggagcttggagaggattagagag gatcagagagagtgtggtgacctaggacttgttgcaatgaaaagcagaaataatcagaag acgctctttgctccccggcccttgactatcgctgttgttcataaaggcttattgggcatc gcaaagactaaaggtgaaggtggtcagggccgcaaggtctcggctatcagaaagctcctc gctgctgcaaagggagatgaagcaaagttcctgattagaggactggaaggtaaactcagg ttgggacttgcggaacgaactgtcttggtctcattaagcagtgcgatgatcacccacgaa caggagcttgttggcaaaacaccaactacggcaatgttggatcagtcggagctcaatctc agaagcgtgtatagtgagttgccgagctacgagatcatcatacccgctatgagagaacac ggcatcatggatattaagaagtattgcaagttgcaacctggtgtccctgtaaaacccatg ttagcaaagccaacaaaagcgatatcagaggttcttgacaggtttgaaaataaacgcttt acttgcgagtacaagtacgacggggaacgtgcccaaatccattacgtgtcgccaaagtct tcaattgagtatccgccagctactcttagcggagaaccaatcaagaatcttgccaaggtc ttttctcgcaactcggaggatctgagtggcaagtatcctgacatccttgcggcgatgaac gagtgggttaggcccgaggttgagagctttgttcttgattgtgaagcggtcgggtgggat gagaccaataatcgtctcctgccatttcaaatgcttcagaccagaaaaaagaaagatgtc gcactagaggatgtaaagatcagagtgtgtgttcatgcattcgaccttctattcttgaat ggaaagcctgttgttcgtgagtctctcgatgataggaggaagctcatgcataaaacgttc atcgaagttcccaatcagttcgtgtttgctcggtacatggatagtagccatctcgaagaa atccgtctcttcctagaccagagtgtgaaggactcttgtgaaggactaatggttaaaatg atggacggtcccgagagcttctatgagcctagtcagaggagtcgtaattggcttaaaatt aagaaggattatatcgatgagttaggagactccttggacttggttgtcattggcgcctac tggggcaggggcaagcgcacttccgtttatggctcctttctactagcttgttacaatcct ggtactcagaactatgaatccttatgcaatattggtactggtttcaccgaggctgaactc gaagagttctatgggactttgcaccccctcgaaattgacagggccaagcctttctacgac catccaagtggtaatgcgggcaaaccggatgtttggttcgaacctaaagtcctctgggag gttaaagcagccgatttgaccttgtcccctcgttacaaggccgcagctggcctggctgga cacccggataagggcgttagtctcaggttcccgagatttattggccccaggaccgataag accggtgaggacgcgaccagttctagtcaaatcgcggagatgtatctccgccaggatcaa gttgcgcataaaactggagccaagggggttgatgacgatttcgaatattga

DBGET integrated database retrieval system