Tuber melanosporum: GSTUM_00009427001
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Entry
GSTUM_00009427001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tml01009
]
GSTUM_00009427001
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00009427001
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00009427001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00009427001
Enzymes [BR:
tml01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
GSTUM_00009427001
Protein phosphatases and associated proteins [BR:
tml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSTUM_00009427001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
GSTUM_00009427001
Membrane trafficking [BR:
tml04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GSTUM_00009427001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
GSTUM_00009427001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
9184861
NCBI-ProteinID:
XP_002840741
INRA:
GSTUM_00009427001
UniProt:
D5GK89
LinkDB
All DBs
AA seq
441 aa
AA seq
DB search
MATGLCYDRRMTSHRIIEGEHPEDPKRISVIYEKIVNCGLVNDPEFSGTSNPENPGLMVR
IEAREATEREIGLIHSRDQFEFARELEDHDDEQLIMMTNEADSVYFNQHTFMCSKLSCGG
AIETCLRVAQGHVKNAIAVVRPPGHHATPDCSMGFCIFNNVCVSAKTLQERMPDIKKILI
LDWDIHHGNGTQDAFYNDPSVLYISLHRFERGTFYPNDPRGDSTFCGSGQGTGFNVNIPW
TEGGKLDGDYIYAFQKLVMPIALEYNPDFVIVSAGFDAAAGDELGECYITPAGFAHMTYM
LMSLAKGKMAVCLEGGYNLSSISDSALAVIKVLMGQAPEKILDPVASPAAANVVQQCIDI
QMRYWRWASERGNGLSLDVRAWQEKILWEKYKMSSAPVMHPSGLVFDNALLMSYKATELV
EIAVLEFNNIFLAAIRPVVSN
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggccactggtttgtgttacgaccgtcgcatgactagtcatcgtataatcgagggtgaa
caccccgaagatcctaagaggatttctgttatatacgaaaagattgtcaactgcgggctt
gtcaatgatccagaattttcaggaacaagcaatcccgagaaccccggattgatggttaga
attgaggccagggaggcaactgaacgtgaaatcggcttgattcatagccgtgatcagttt
gaatttgcccgagagcttgaagatcatgatgacgagcagttaatcatgatgacaaatgag
gctgattcggtttactttaaccagcatacctttatgtgttctaagctttcttgcggtggg
gcaatagaaacttgccttcgagttgctcaaggtcacgtaaagaatgcaattgcggtagtt
aggccacctggccaccacgcgactcctgactgctcaatgggtttctgtatctttaataat
gtctgtgtatccgctaagactctacaagagaggatgcctgatattaagaagattctaatt
cttgattgggacattcatcatggaaatggtactcaggatgccttttataacgacccatct
gttttatatatttcccttcacaggttcgagaggggaacattctatccgaacgaccctagg
ggagattctacattctgcgggtcgggacaaggtaccggattcaatgtaaacatcccttgg
actgaaggtggtaagctggacggcgattacatatatgcttttcaaaagcttgtaatgcct
atagctttggaatataatccagactttgttattgtttcggctggattcgatgcggctgct
ggtgatgagctcggggagtgttacattactcctgctggctttgcccatatgacctacatg
ttaatgagcctagcaaagggcaaaatggctgtttgtttagaaggaggatataatctatcc
tcgatctcagattctgcccttgctgtcataaaggttttgatgggccaagcgcctgagaag
atcctggacccggtagcgtccccggcggcggcaaatgtagtacagcagtgtatcgatatc
caaatgagatactggcgttgggcttccgagagaggtaatgggctttccctagatgtacgt
gcgtggcaagagaaaattttatgggagaagtataagatgtcatcagcaccagtcatgcat
ccgtcgggtcttgtgtttgataatgcgctgctgatgtcctataaagctaccgaattggtt
gagattgctgtcttagaatttaacaatatttttctggcggctataaggccagtagtaagt
aattga
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integrated database retrieval system
