KEGG   Tuber melanosporum: GSTUM_00010406001
Entry
GSTUM_00010406001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tml  Tuber melanosporum
Pathway
tml03082  ATP-dependent chromatin remodeling
tml03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GSTUM_00010406001
   03083 Polycomb repressive complex
    GSTUM_00010406001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00010406001
Enzymes [BR:tml01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     GSTUM_00010406001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     GSTUM_00010406001
   HDAC complexes
    Sin3A-HDAC complex
     GSTUM_00010406001
    BRAF-HDAC complex
     GSTUM_00010406001
    REST complex
     GSTUM_00010406001
    SHIP complex
     GSTUM_00010406001
    MiDAC complex
     GSTUM_00010406001
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     GSTUM_00010406001
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    GSTUM_00010406001
  Chromatin remodeling factors
   NuRD complex
    GSTUM_00010406001
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 9186483
NCBI-ProteinID: XP_002841308
INRA: GSTUM_00010406001
UniProt: D5GLT2
LinkDB
AA seq 642 aa
MKPHRIRMTHSLIMNYRLYKKMEIYRAKPATKQEMCQFHTDEYIDFLSKVTPDNMEQYSK
EQGKYNVGDDCPVFDGLFEFCGISGGGSMEGAARLNRGKCDIAINWAGGLHHAKKSEASG
FCYVNDIVLGIIELLRYKQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
ELRDIGVGAGKYYAVNFPLRDGITDTTYKEVFEPVIGHVMEFYQPDAVVLQCGADSLSGD
RLGCFNLSMAGHANCVEYVKKFNLPTLVVGGGGYTMRNVSRAWTYETGILVNQKVGPNLP
FSDFYEYFGPDYELDVRPSNMENLNSKEYLEKIKIQVLSNLERTRHAPSVQTTDVGKGLT
EHQEEQDAILDDIDEDGPGMDARQTQRQWDRATEKEGELYSDSEDEEITSSMGVRKTSKK
GLRNVRDWKEGGSGTGSGNATPFTGPGGSDNASESAGGNTAKGSGATSKRDGEGRDLTEF
DEELEALRKETEEEVQPDNDGDVEMGDDEQPPPSADALTDEVADEEMTDVPAQSSTSSTK
VDPIPTAESLSQAKPEAATTDDKIRVEASEFSKAETPAKGSGSGVPKPSESSVANAAPEG
SNSMASTTDRHSSKPPLVADESVSSTAKAPANPVEAPAKEEK
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgaagccgcacagaatccggatgacccatagtttaatcatgaactaccggctttacaag
aaaatggaaatttatcgagcaaaaccagccactaaacaagaaatgtgtcaattccacacg
gacgaatacatcgattttctgtcgaaggtgacgcctgacaacatggaacaatattccaaa
gagcaaggaaaatacaatgtcggcgacgattgcccagtattcgacggtttgtttgagttt
tgcggcatatccgggggtggcagtatggaaggtgccgccagactcaaccgtggaaaatgc
gatattgcgattaattgggccggcggccttcatcacgcgaaaaagagtgaagcttctggg
ttctgctatgttaatgacattgtcctcggaattattgaactactccggtacaaacagcgt
gttctttacattgatatcgacgttcaccacggtgatggcgtggaagaagctttttatacc
actgatcgcgttatgactgtatccttccacaagtacggtgaatactttccaggtaccggt
gaacttcgtgacattggtgttggcgctggaaagtactatgcagtaaacttcccattacgc
gatggtattaccgataccacatataaggaggttttcgaaccagtcattgggcacgtgatg
gagttctatcagcctgatgctgtggttctgcagtgtggtgcggacagcttgtcaggtgat
agactggggtgcttcaatctaagcatggcgggtcatgcaaattgcgttgaatatgtcaag
aaattcaaccttccaactcttgtggtcggcggtggtggctatacaatgagaaatgtcagt
agagcttggacatatgaaaccggcatccttgtcaaccagaaggttgggccaaacttgccc
tttagtgacttttacgagtactttggccccgattacgagcttgatgtccgcccatcaaac
atggaaaacctcaattcaaaggagtacttggaaaaaataaaaatacaggtcctgtccaat
ctcgaacgtactcgacatgcccccagtgtccagactacagacgttgggaaaggtttgaca
gagcatcaggaggagcaagatgcaattttagacgatattgatgaggacggcccgggcatg
gatgcccgtcaaactcagaggcagtgggatcgcgcaacagagaaggagggagagctgtac
agtgacagtgaggatgaagagatcacaagttcaatgggagttcggaaaactagcaaaaaa
gggctgcgcaatgttcgggattggaaagagggtggttccgggacaggatccggaaatgca
actcccttcacaggacctggcggaagcgataatgcaagtgaatccgccggtggtaacaca
gctaaaggcagtggagccacaagcaaacgagatggagaaggtcgtgacctcaccgagttc
gacgaggaactcgaggcattgagaaaagagacagaagaagaggttcaacccgacaacgac
ggagacgtagagatgggagatgatgagcagccaccgccaagtgccgatgctctaacagat
gaagtagcggatgaagaaatgaccgatgttcccgcacaatcttcaacatcctcaacaaaa
gtagaccctatccccacggcggaatccttatcccaagccaagcccgaggccgcaaccact
gacgacaagatcagagtcgaggctagcgaattttccaaagcagaaactcctgcgaagggt
tccggttccggagtacctaagccctccgagtcttctgttgcaaatgcagctcccgaggga
tctaattctatggcgtctaccactgacagacatagctcaaaacctcctctcgtggcagac
gagtctgtatcaagtaccgctaaggctcctgccaacccggttgaggctcccgccaaagaa
gagaaataa

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