Tuber melanosporum: GSTUM_00010406001
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Entry
GSTUM_00010406001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tml
Tuber melanosporum
Pathway
tml03082
ATP-dependent chromatin remodeling
tml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSTUM_00010406001
03083 Polycomb repressive complex
GSTUM_00010406001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00010406001
Enzymes [BR:
tml01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
GSTUM_00010406001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
GSTUM_00010406001
HDAC complexes
Sin3A-HDAC complex
GSTUM_00010406001
BRAF-HDAC complex
GSTUM_00010406001
REST complex
GSTUM_00010406001
SHIP complex
GSTUM_00010406001
MiDAC complex
GSTUM_00010406001
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
GSTUM_00010406001
Heterochromatin formation proteins
Other heterochromatin formation proteins
GSTUM_00010406001
Chromatin remodeling factors
NuRD complex
GSTUM_00010406001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
9186483
NCBI-ProteinID:
XP_002841308
INRA:
GSTUM_00010406001
UniProt:
D5GLT2
LinkDB
All DBs
AA seq
642 aa
AA seq
DB search
MKPHRIRMTHSLIMNYRLYKKMEIYRAKPATKQEMCQFHTDEYIDFLSKVTPDNMEQYSK
EQGKYNVGDDCPVFDGLFEFCGISGGGSMEGAARLNRGKCDIAINWAGGLHHAKKSEASG
FCYVNDIVLGIIELLRYKQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
ELRDIGVGAGKYYAVNFPLRDGITDTTYKEVFEPVIGHVMEFYQPDAVVLQCGADSLSGD
RLGCFNLSMAGHANCVEYVKKFNLPTLVVGGGGYTMRNVSRAWTYETGILVNQKVGPNLP
FSDFYEYFGPDYELDVRPSNMENLNSKEYLEKIKIQVLSNLERTRHAPSVQTTDVGKGLT
EHQEEQDAILDDIDEDGPGMDARQTQRQWDRATEKEGELYSDSEDEEITSSMGVRKTSKK
GLRNVRDWKEGGSGTGSGNATPFTGPGGSDNASESAGGNTAKGSGATSKRDGEGRDLTEF
DEELEALRKETEEEVQPDNDGDVEMGDDEQPPPSADALTDEVADEEMTDVPAQSSTSSTK
VDPIPTAESLSQAKPEAATTDDKIRVEASEFSKAETPAKGSGSGVPKPSESSVANAAPEG
SNSMASTTDRHSSKPPLVADESVSSTAKAPANPVEAPAKEEK
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcacagaatccggatgacccatagtttaatcatgaactaccggctttacaag
aaaatggaaatttatcgagcaaaaccagccactaaacaagaaatgtgtcaattccacacg
gacgaatacatcgattttctgtcgaaggtgacgcctgacaacatggaacaatattccaaa
gagcaaggaaaatacaatgtcggcgacgattgcccagtattcgacggtttgtttgagttt
tgcggcatatccgggggtggcagtatggaaggtgccgccagactcaaccgtggaaaatgc
gatattgcgattaattgggccggcggccttcatcacgcgaaaaagagtgaagcttctggg
ttctgctatgttaatgacattgtcctcggaattattgaactactccggtacaaacagcgt
gttctttacattgatatcgacgttcaccacggtgatggcgtggaagaagctttttatacc
actgatcgcgttatgactgtatccttccacaagtacggtgaatactttccaggtaccggt
gaacttcgtgacattggtgttggcgctggaaagtactatgcagtaaacttcccattacgc
gatggtattaccgataccacatataaggaggttttcgaaccagtcattgggcacgtgatg
gagttctatcagcctgatgctgtggttctgcagtgtggtgcggacagcttgtcaggtgat
agactggggtgcttcaatctaagcatggcgggtcatgcaaattgcgttgaatatgtcaag
aaattcaaccttccaactcttgtggtcggcggtggtggctatacaatgagaaatgtcagt
agagcttggacatatgaaaccggcatccttgtcaaccagaaggttgggccaaacttgccc
tttagtgacttttacgagtactttggccccgattacgagcttgatgtccgcccatcaaac
atggaaaacctcaattcaaaggagtacttggaaaaaataaaaatacaggtcctgtccaat
ctcgaacgtactcgacatgcccccagtgtccagactacagacgttgggaaaggtttgaca
gagcatcaggaggagcaagatgcaattttagacgatattgatgaggacggcccgggcatg
gatgcccgtcaaactcagaggcagtgggatcgcgcaacagagaaggagggagagctgtac
agtgacagtgaggatgaagagatcacaagttcaatgggagttcggaaaactagcaaaaaa
gggctgcgcaatgttcgggattggaaagagggtggttccgggacaggatccggaaatgca
actcccttcacaggacctggcggaagcgataatgcaagtgaatccgccggtggtaacaca
gctaaaggcagtggagccacaagcaaacgagatggagaaggtcgtgacctcaccgagttc
gacgaggaactcgaggcattgagaaaagagacagaagaagaggttcaacccgacaacgac
ggagacgtagagatgggagatgatgagcagccaccgccaagtgccgatgctctaacagat
gaagtagcggatgaagaaatgaccgatgttcccgcacaatcttcaacatcctcaacaaaa
gtagaccctatccccacggcggaatccttatcccaagccaagcccgaggccgcaaccact
gacgacaagatcagagtcgaggctagcgaattttccaaagcagaaactcctgcgaagggt
tccggttccggagtacctaagccctccgagtcttctgttgcaaatgcagctcccgaggga
tctaattctatggcgtctaccactgacagacatagctcaaaacctcctctcgtggcagac
gagtctgtatcaagtaccgctaaggctcctgccaacccggttgaggctcccgccaaagaa
gagaaataa
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