Tuber melanosporum: GSTUM_00011068001
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Entry
GSTUM_00011068001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00011068001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00011068001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
GSTUM_00011068001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GSTUM_00011068001
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
GSTUM_00011068001
microRNA pathway
RISC loading complex
GSTUM_00011068001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL1
ArgoL2
ArgoN
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9185853
NCBI-ProteinID:
XP_002841736
INRA:
GSTUM_00011068001
UniProt:
D5GN34
LinkDB
All DBs
AA seq
807 aa
AA seq
DB search
MSPDPKIRRIRKRVFELLELTSFSATRDLMATDYAKTIITARKLEIADDKLQVEVRYFDA
DQAGPHEKSKVYAVTITLVQLLEPNSLKDYVNGLDPDFDSSPAIQALNIILAKPPSQNAG
VIPLGKSKFFVSEPNPQNQQHLPRGLLALRGYYSSIRPSMGRVLCNVNVCMTAFYKEGNL
AELMREFGKRSELGGFLRGLRVSTKHITDPNGKPKLQYKTIANLTGKSAREATFVSDDGS
TITVAAYFKKKYNIVLANPDFPCVNVGTREKSILLPPELATVLPGQSFKGKLLDEQTREM
ITYACRRPRQNAESIVGEGLSILGLKPSSQLLNPFNLSVSTEMVTVPARILAAPPVQYAG
GPKTTSDASWNLRDVRFLKSGSAKTWAAIILKDGSSNVQDPLGLCNALQSMCRKCGVVLP
PLTNRDISVVQMAMGQELATKLTPCFDALKKRGVQIALVILPSQDKANYALIKTLGDVRF
GVGTVCAQSSKIQNQKGQMQYFANLALKFNLKLHGRNHGLGKTDMGFLTQKTTMIVGCDV
THPSPGSLRGTPSIAGVVASIDMEYAQYPASLRLQESKKEMITELREMMVERLSLWRDKN
SGRLPEAILVYRDGVSEGQFKTVLDAELPKIREACVVMRADYRPKVTIIIVGKRHHTRFY
PTESDKADRLGNPAPGTIVDRGVTAVYDYDFYLQAHAGLQGTTRPAHYYVIHDKNGFDAD
SLQTLTHNLCYLFGRATKSVSICPPAYYADLVCERGRCYIYGLLNASDSGSVKSTNSEDE
AKANYAKAVQMWSGGPHADIRQTMYYL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccgaccctaagatcaggaggatcaggaaacgtgtttttgagctcttagagttg
acttctttcagtgcaacaagagatcttatggcaactgactatgccaaaacgattattact
gcaaggaagctggagattgctgatgataagcttcaggtggaggtccgttattttgatgcg
gaccaggcgggaccgcatgaaaagtctaaggtctatgctgttacgattacattagtacag
ttgcttgagccaaatagcctcaaggattatgttaatggattggatccggattttgattca
tcacctgcgattcaggcgctaaacattattttggccaagcctccttcgcagaatgcaggt
gttattcctttgggaaagtctaagttttttgtttcggagccaaacccccaaaatcagcag
catctacctcgcggattgctagctcttcgcgggtactattcctcgattcgcccctcaatg
ggccgtgtcctctgcaatgttaatgtttgcatgacagctttctacaaagaaggaaacctt
gcagaattgatgagggaatttggaaagcgctctgaacttggtggttttctgaggggtttg
cgcgtgagcacaaaacatatcacggaccctaatggcaaaccgaagcttcagtataagacg
attgccaaccttactggaaaatctgcgagggaagctacatttgtttctgatgatggctca
actatcactgttgctgcttatttcaagaaaaaatacaatattgttcttgcgaatcctgat
tttccgtgtgttaacgtcggaacaagagaaaagtcgatcctattgccacctgagctggct
acggtgctgcctggacagtcttttaagggaaagcttttggatgagcaaacacgtgaaatg
atcacgtatgcttgtcgtcgccccaggcaaaatgcggaatcaattgtgggagagggtttg
tctattcttgggctcaaaccttcaagccaactactgaatcctttcaatttatccgtctca
actgaaatggttacggttccagcgaggattctggctgcaccgcctgtacaatatgcaggc
ggcccaaagacaaccagcgatgcgtcgtggaaccttagggatgttagatttctcaagagt
ggttcagctaaaacttgggcagcaattattttaaaggacggatcaagcaatgtgcaggat
cctctgggtttatgcaatgcccttcaaagcatgtgccgaaagtgcggtgttgtccttccg
cctttgactaatcgggatatctcagtcgttcaaatggcaatgggccaggaattggctaca
aaactaacaccttgctttgatgcgttaaagaagcgaggagttcaaattgccctcgtcatt
cttccgagtcaagataaggcaaactatgctcttatcaagacactgggtgatgtgagattt
ggtgttggaactgtttgtgcccaatctagcaagattcagaaccaaaagggtcagatgcaa
tattttgccaatcttgcattgaagtttaatttgaagcttcatggtagaaaccatgggctt
ggaaagacggatatgggctttttgacacaaaagacaaccatgattgttgggtgtgacgtt
acccatccttccccgggtagtttgaggggtactccgtccatcgctggtgttgttgccagt
atcgatatggagtatgctcaatatccggcttccttgaggcttcaagagtctaaaaaagag
atgatcactgagctacgggagatgatggtcgagcgcttgtccctctggagggacaagaat
agcggcaggctacctgaagcgattctcgtatatcgcgatggtgtcagcgaaggtcagttt
aagactgttcttgatgcggagcttccgaagattcgtgaagcctgtgttgttatgagggcg
gattataggcccaaggttacaattatcatcgtcggtaaacgtcatcacactcgcttctat
ccgaccgaaagcgataaagccgacagacttggaaatcccgcgcctggcacaatagttgat
agaggcgttacggccgtttatgactatgacttttacctacaagcgcacgcgggtcttcag
ggtaccactcggccagcccactactatgtcattcacgacaagaatgggtttgatgcagac
tcactacaaaccttgacccacaatctctgttaccttttcggccgtgctaccaagtctgtg
agcatttgcccaccagcttactatgccgacttggtctgtgagcgtggtcgttgttatatc
tacgggcttcttaacgctagcgactctggcagcgttaaaagcaccaatagcgaggatgaa
gctaaggcaaattatgcgaaagcggtacagatgtggtctggaggtccgcatgctgatatt
agacagacaatgtactatctttaa
DBGET
integrated database retrieval system
