Tistrella mobilis: TMO_0216
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Entry
TMO_0216 CDS
T02128
Symbol
dadB
Name
(GenBank) putative alanine racemase, catabolic
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
tmo
Tistrella mobilis
Pathway
tmo00470
D-Amino acid metabolism
tmo01100
Metabolic pathways
tmo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TMO_0216 (dadB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TMO_0216 (dadB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tmo01011
]
TMO_0216 (dadB)
Enzymes [BR:
tmo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
TMO_0216 (dadB)
Peptidoglycan biosynthesis and degradation proteins [BR:
tmo01011
]
Precursor biosynthesis
Racemase
TMO_0216 (dadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AFK52055
UniProt:
I3TH17
LinkDB
All DBs
Position
complement(225064..226230)
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AA seq
388 aa
AA seq
DB search
MNVSVSAALSDRETTRPRTADDAAAARAGAFLTIDLAALRENYLALRSRLGGRACAAVVK
ADAYGLGAARIAPVFHEAGCRHFFVAHLDEGLALKQALPDDCAIMVLHGPMPGSEADCAH
AGLVPVLNSMEQIEAWGGLARALGRRLPAFVQIDSGMSRMGLPEADITRIAATPDLLDGI
IVEAVMSHLACADEPDHPANAEQLANFRRRKALLPDAPASFANSSGIFLGPDYQFDLARP
GAALYGLNPQPHLPNPMKNVVRLMAKVVQTREIPAGAHVGYSWRFRADRPTRIATVSVGY
ADGWLRSLSGRGAVLVDGRAAPIAGRVSMDSITVDVTDLPPEAVKPGSLVELIGPDQTPD
AVAALAGTIGYEVLTSLGNRYHRRYLNG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgagcgtcagcgccgccctgtccgaccgggagacgacacgcccccgcaccgcg
gatgatgccgcggcagcccgcgccggggccttcctgaccatcgatcttgccgcccttcgc
gagaattacctggcgctgcgcagccgccttggcgggcgggcctgcgcggcggtggtcaag
gccgatgcctatggtctgggggccgcacggatcgcgccggtctttcatgaggccggctgc
cggcatttcttcgtcgcccatctggatgaaggcctggccctgaagcaggcactgcccgac
gactgcgccatcatggtgctgcacgggccgatgccgggctcggaagccgattgcgcccat
gccgggctggtaccggtgctgaattccatggagcagatcgaggcctggggtggtctcgcc
cgggcgctgggccggcggctgccggccttcgtgcagatcgacagcggcatgtcgcgcatg
ggcctgcccgaggccgacatcacccgcatcgccgccacgcccgacctgctggacgggatc
atcgtcgaggcggtgatgagccatctggcctgtgccgacgagcccgaccatccggccaat
gccgagcagctggcgaatttccgccgccgcaaggcgctgctgcccgacgcccccgcctcg
ttcgccaattcgagcggcatcttcctgggcccggattaccagttcgatctggcccggccg
ggcgcggcgctctacggcctgaacccgcagccccatctgcccaacccgatgaagaacgtg
gtccggctgatggccaaggtggtgcagacccgcgagatcccggcaggtgcccatgtcggc
tattcctggcgcttccgtgccgatcgtccgacccgcatcgccaccgtttcggtcggctat
gccgatggctggctgcgcagcctgagcggccgcggcgccgtcctggtcgacggccgggcg
gccccgatcgccggccgggtgtcgatggacagcattaccgtcgacgtgaccgacctgccc
cccgaggccgtgaagcccggcagcctggtcgagctgatcggccccgatcagaccccggat
gccgtggcggccctggccggcaccatcggttacgaggtgctgaccagcctgggcaaccgc
tatcaccgccgctacctgaacggctga
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