Tremella mesenterica: TREMEDRAFT_34982
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Entry
TREMEDRAFT_34982 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tms01009
]
TREMEDRAFT_34982
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_34982
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_34982
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_34982
Enzymes [BR:
tms01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
TREMEDRAFT_34982
Protein phosphatases and associated proteins [BR:
tms01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
TREMEDRAFT_34982
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
TREMEDRAFT_34982
Membrane trafficking [BR:
tms04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TREMEDRAFT_34982
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
TREMEDRAFT_34982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
DUF1749
Ser_hydrolase
Motif
Other DBs
NCBI-GeneID:
18492645
NCBI-ProteinID:
XP_007007504
JGI:
Treme1_34982
UniProt:
R7SB11
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MEVDRVESPQPPQIPALDIAPPLPSDFPAPPLAPAQILDLIVEREKAVTPSLSSPVTADR
TGYIYDPLMMLHAPDEYIPTDAKVDSSDGHPEEPMRIMRIFARLNEQGLIRRMRKLNFHQ
VTFEQVMLVHTEDHWNKVQGTETLTDQYIKDSKYYYDQLSLYVCRQTAHCARLSCGGVIQ
ACISVCKGEVRNAFAIVRPPGHHAEPDEHMGFCFYNNVAVATKEVQRLGLAKKVLILDWD
VHHGNGTQRAFWEDPDVLYMSIHRHDGGKFYPTSDFGALDMVGSGPGEGKSVNIPWPSGG
FGDGDYIYAFQKIIMPIAYEFAPDLVIISAGFDAAKGDQLGACEVTPAAYGHMTHMLCAL
AGGKVVVALEGGYNLTAISDSSLAVAQVLLGHTPPDLEPLEASEVATEVMHQVAKVQSKY
WKSIDVKACEPPEVETMDDIAPVISIADLLKIHRAHHLYDHHQLFQIPLASQALEEAFGG
QISCSEGVYEVGPKGVLVVFVHDFGNLRVETDGVHTTNIHLTNSYLLDTSDLIVNWVKSN
GYNLIDVNILKQLPTEFTRTSVSVAKSSPKLEGQLVRYLWDNYIELSECEKVVLIGHGTG
CSAVMELINHREVQRKVKAIVQVAGMHSMVRIDPNNESKREWFKTRNRIYLPSAHPILQD
ERAKRRLGGQIHTAEKAKVVDVLNEVLEQIKEFVESKLTDGVSSTLNGHVHTNGIASQPE
SRISPSVSQSVS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgatcgtgtggaatctccccaaccgccccaaattcccgccttggacatcgcc
cctcctcttccctcagatttccctgctcctcccctggcccctgctcagatcctggatctc
atcgtcgagagggaaaaagctgtcactccttccctctcttcacccgtcaccgcagatcgc
acgggttacatttacgacccgctcatgatgctccacgccccggacgaatacattcctacc
gacgcaaaagtcgactccagtgatggtcatccagaagaacctatgcggatcatgcggata
ttcgcgagattgaatgaacagggattgatcagaaggatgagaaaactcaattttcatcaa
gtcacatttgagcaggtcatgcttgtgcacacggaagatcactggaataaggtgcagggc
acggagactctgacggaccaatatatcaaagatagcaaatattactacgatcaattatca
ctctatgtttgtcgacagacggctcattgcgccagattgtcatgtggaggggtcatccaa
gcttgcatatctgtatgcaaaggagaagtcagaaacgcctttgctattgttcgtcctcct
ggtcatcatgctgaaccggacgagcatatggggttctgtttctacaacaacgtagccgtg
gcaacaaaggaggtgcagagattaggtctagcgaagaaggttttgattttggactgggat
gttcatcatggtaatggtacacaacgtgcgttctgggaagacccagatgtcctctatatg
tccattcatcgacatgacggaggtaaattctatcccacatcagattttggcgctctcgat
atggtcggttcaggtccaggggagggcaaatctgtcaacattccttggcccagcggagga
tttggcgatggcgactacatatatgcgtttcagaagattatcatgcctatcgcttatgag
tttgcgcctgatcttgtcatcatctctgcgggtttcgacgcagccaagggcgatcaactg
ggagcgtgtgaggtcactccggccgcttatggccacatgacccacatgttatgtgcccta
gcaggaggcaaggtggtcgtggcgctggagggcggatacaatctgacagctatttccgac
tcatcactcgccgtcgctcaggtcctgcttggtcacaccccaccggaccttgaacctctc
gaagcgtctgaggtggccacggaggtgatgcatcaagtcgcaaaggttcagtcgaagtac
tggaagtcaattgatgtgaaagcgtgtgagcctcctgaagtggaaaccatggatgatata
gcacctgtcatatccatcgccgacctcctcaaaatacatcgagctcatcatctgtacgat
catcatcaactcttccaaatccctctggccagtcaagcgctagaagaagcatttggtggg
caaatatcgtgcagcgaaggggtgtacgaagtgggcccaaaaggcgtcttggtggtattt
gtgcatgacttcggcaatttgagagttgaaacagatggagttcatacgaccaatatacac
ctcaccaatagctacctcttggacacgagcgatttaattgtcaattgggtcaaatcaaat
gggtataatctcatcgacgtgaacatcttgaagcagcttcccacagagttcacccgtaca
tcagtatcagtggcaaagtcatcaccaaagcttgaagggcagctggtgaggtatctttgg
gataattacatagaactctcagaatgtgagaaagttgtattgataggtcatggaacgggt
tgctcggcggtgatggagttgatcaatcatcgagaagtccaacgaaaagtcaaagccatc
gtgcaagttgcaggaatgcattcgatggtccggatagaccccaacaacgagtctaaaaga
gaatggttcaaaactcggaatcggatttatctcccatctgcgcatcctatattgcaggat
gaacgtgccaagcggagattaggaggtcagatacatactgcggagaaagcaaaagtggta
gacgttttgaacgaagttttagaacaaatcaaagaattcgtagagtctaaactcaccgat
ggcgtatcttcaacactcaacggacatgtccatacgaatggaattgcttctcaaccagaa
tcaagaatatcaccatctgtatcgcaatccgtatcttga
DBGET
integrated database retrieval system
