Tremella mesenterica: TREMEDRAFT_41668
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Entry
TREMEDRAFT_41668 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
tms
Tremella mesenterica
Pathway
tms00250
Alanine, aspartate and glutamate metabolism
tms00410
beta-Alanine metabolism
tms00430
Taurine and hypotaurine metabolism
tms00650
Butanoate metabolism
tms01100
Metabolic pathways
tms01110
Biosynthesis of secondary metabolites
Module
tms_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
TREMEDRAFT_41668
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TREMEDRAFT_41668
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
TREMEDRAFT_41668
00430 Taurine and hypotaurine metabolism
TREMEDRAFT_41668
Enzymes [BR:
tms01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
TREMEDRAFT_41668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
18493267
NCBI-ProteinID:
XP_007000938
JGI:
Treme1_41668
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MQNGHQVAEQPYQSRTHNAEQFEELLDAVREELTPFIRAADQSSSNKHALSSSRTLVNPL
QPRALTEQLDLDLPQVGTGTPGLLQAIQDVLRGSVNTWDQGFMDKLYASTNPVGVISELV
LAVLNTNVHVYHVSPALTLIEKKVSRALADLFGFNGPHGGGISQPGGSASNMSSIIVARN
TLFPHTKKRGLVGLKPVLFTSAHGHYSLEKAAQIMGFGSDACRSVSCDEDGRMIPSELRR
QIKQAIQQDEAPFYVNATAGTTVLGSFDPLEAIADICEEFHLWMHVDGSWGGSVVFNSSI
GQGRLDGIHRANSITISPHKMLGVPITCSFLLGRDMRQFHRAMTLPAAYLFHEDANEDGK
IYDLADLTPQCGRKGDALKVYLSWTFYGAQGYSDRIARAYARADDFVTQLEKSPNTYLVS
RRPLPCLQVCFYYTPGRLLSDNVTNSRRTEDMVRRLLHRGFMIDFASGKNGKFIRVVING
DTLPGTVEALLECIEEEGNRLLDQEMHQGLVL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatggccatcaagtagcagagcagccgtaccagtccaggactcacaacgcggag
cagtttgaagagcttctcgatgccgtacgggaagagttgacacctttcatccgtgccgca
gaccaatcgtcctcaaacaagcatgctctctcttctagtcgtaccctcgtgaacccgtta
caacctcgcgccttgacagagcagctggatttggatttaccgcaagtaggaactggcact
cctggacttcttcaagcaatacaagatgtgctccgaggaagtgttaatacttgggatcag
gggttcatggacaagctatatgcctccacaaacccagttggtgtcatctccgagctcgtt
ttggcagttttaaacaccaatgtacatgtctatcacgtctctcctgccctgacattgatc
gagaagaaggtcagccgggctctagcggatctctttggcttcaatggtcctcatggtggt
ggtatctctcaaccgggtggttcagcgtcaaacatgtcatccatcatcgtggctcgtaac
actctgtttccccatacgaagaaacgaggtttggtgggcttgaaaccagtcctctttact
tctgcccatggacattattcactagagaaagccgcccaaatcatgggatttggaagtgat
gcttgtcgatcggtgtcatgtgatgaagatggtcgaatgattccttccgagttacgtcgt
cagatcaagcaagcgatacaacaggacgaagcacctttttatgtgaacgcgacagccggt
accaccgtactgggaagttttgaccctttggaagccatagccgatatttgtgaggaattt
catctgtggatgcacgtcgatggaagttggggagggagcgtcgttttcaactcttccatt
ggacaaggtagactggacggaattcatcgtgccaacagcatcaccatcagtccacacaag
atgctcggtgtcccgataacatgctctttcttgcttggcagagatatgcgacagtttcat
cgagccatgacgcttcccgcagcttatctcttccacgaagacgccaacgaagatggtaaa
atatacgatttggcagatctgacaccgcaatgtggacgcaaaggagatgctctcaaagta
tacctttcatggacgttctacggagctcaaggatactcggacaggattgcaagagcatac
gcccgggcagatgactttgtcactcagttggagaaatccccgaatacatacttggtgtct
cgaagaccgctgccctgtttgcaggtatgcttttactataccccgggaagactcctctct
gataacgtcaccaatagccggcgtaccgaggacatggtgagaaggctgctacacagaggc
tttatgattgactttgcgtctggcaaaaatggcaagttcatcagagtcgtgatcaacggg
gatacattgcccggcacggtcgaggctctgctcgagtgcatcgaggaggaaggtaacagg
ttattagatcaagagatgcatcagggactcgttttataa
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