Tremella mesenterica: TREMEDRAFT_70991 Help Entry TREMEDRAFT_70991  CDS       T03139                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism tms  Tremella mesenterica Pathway tms03020   RNA polymerase tms03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:tms00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     TREMEDRAFT_70991   09124 Replication and repair    03420 Nucleotide excision repair     TREMEDRAFT_70991  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tms03021]     TREMEDRAFT_70991    03400 DNA repair and recombination proteins [BR:tms03400]     TREMEDRAFT_70991 Enzymes [BR:tms01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      TREMEDRAFT_70991 Transcription machinery [BR:tms03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      TREMEDRAFT_70991 DNA repair and recombination proteins [BR:tms03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       TREMEDRAFT_70991 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 MRNIP Motif Other DBs NCBI-GeneID:  18498440 NCBI-ProteinID:  XP_007002088 JGI:  Treme1_70991 LinkDB All DBs Position Unknown AA seq 1214 aa AA seqDB search MGYDNDAKPVEEEQLEGEDYWTIISSYFEGKGLVRQQLESFNEFIENTLQEIVDENPLII LDQHAQFTGKEGDELRRHQLRFGQIYLARPTTTESDGIAAPMFPQEARLRNLTYSAPLYV EIERRTFVAAGADEDPLDTEWQPLLDAYGEPVVEKTKAFIGKVPVMVRSHFCHLENLPDE SLYHLKECPYDSGGYFVVKGSEKVLIAQERMAANQVYVFRKQSPYTYFATVTSQMERGGK MPSETEVRMYPRSSGGTTGSVIHVRLPYIKVPIPIVIVFRALGIIADSDILEHICFNMGD TQMLEMLRPCVEEAFAIQSRETALDFIGRRHNKDIGTRMQRQLVAFDILQKEFLPHVSVS EGFESKKAYFLGYMIHRLCSAALNRRDLDDRDHFGNKRMDLAGPLLANLFRGLFKNLTKR VHRHLTTCIEKNRPFVFSEALQPSIITDGFRYAIATGNWGTGTNRRVGVSQVLNRYTYAS TLSHLRRTNTPIDRGSKATKPRQLHNTHWGMVCPAETPEGAACGLVKNLALLSYISVGSY AAPVMEFLEEWGLEDQSEFQHNPGATKVFVNGVWMGVHRNAGTLYANLLQMRRGGQLKHE VSIVRDIRERELRLCTDAGRVCRPLLIVDQRTQSLKIKKSHIERTEILLEGGEDIATGSA WIELLNDGVIEYVDAAEEETILIAMTSEDLVNARTASGKDELVRQRAAHNLDHFDPAARV KSTNWSQNYTHMEIHPSMILGVCGSIIPFPDHNQSPRNTYQSAMGKQAMGVHLTNYQLRM DTMANILYYPQKPLATTRSMEYLKFSELPAGQNAIVAIMCYSGYNQEDSVIMNQSSIDRG LFRSLYYRSYTDAEKMTGMEKVETIEKPDRKDTLRMKMGSSDRYAKLDIDGLIAPATNVN GDDIIIGKTAPIPEESEELGQRTSLHTKRDVSTPLKSTEQGVVDQVMLSTNGDGHKFVKI RIRSTRVPQIGDKFASRHGQKGTIGITYRQEDMPFTAEGITPDIIINPHAIPSRMTIGHL VECLLSKLSTMTGSEGDATPFTELTVEKVSKFLRQRGYQSRGLEVMYHGHTGRKLQAQIY FGPTYYQRLKHMVDDKIHARARGPLQILTRQPVEGRSRDGGLRFGEMERDCMISHGIAAF LKERMYDSSDGFRVHVCDQCGLMAIANLKKQEFHCSVCRNSTQISQIYIPYAAKLLFQEL QAMNIAVRMYGEAE NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt atgggctacgataacgatgccaaacctgtcgaagaggaacaattagagggggaagattat tggactatcatctcttcttattttgagggaaagggtttggtacgacaacaattggaaagt ttcaacgaatttatcgagaatactttacaggagattgtggatgagaatccattgataata ttggatcaacatgctcagtttactggcaaagagggagatgaactacgtcgacatcaactc agatttggccaaatttacctcgctcggccaacgaccactgagagtgatggtatagccgcc cccatgtttccccaagaagctcgtctcagaaatttgacctactccgcccctctatacgtc gagatcgaacgcagaactttcgtcgcagctggtgccgatgaggatccactggatacggaa tggcaacccctcttggatgcttacggcgagccagtggtggaaaagacaaaggcgttcatc ggcaaggtgcctgtaatggttcgatctcatttttgtcatctagaaaatctacccgatgaa tctctctaccacctcaaagagtgtccatatgattcgggcggttatttcgtcgttaaaggt tcggagaaagtcctcattgctcaagagagaatggcagcgaatcaggtgtacgttttcaga aaacaatcgccttatacgtatttcgccacggtcacgagtcaaatggagaggggtgggaaa atgcctagtgaaactgaggttcggatgtatcccaggtcatctggtggtacgaccggctcg gtcatacacgtacgcttgccctatatcaaagtccctatccctatcgtcatcgtcttcaga gcacttggtatcatcgccgactcggacattttagagcatatctgtttcaacatgggtgat acacaaatgcttgaaatgcttcggccttgtgtcgaggaagctttcgccatacaaagtcgc gagaccgccctcgatttcatcggtcgacgacataacaaggacattggtacacgtatgcag cgacaacttgtcgctttcgatatcctgcagaaggagttcctccctcacgtgtcggtttcc gaaggttttgaatcgaaaaaagcctatttccttggttacatgatccatcgtctgtgctcc gccgccttgaacagaagagaccttgacgatcgtgatcactttggtaacaagcgtatggac ttggccggtccattactggccaacttgttccgaggattattcaagaacctcaccaagcgt gttcaccgtcatctgaccacatgtatcgaaaagaaccgacctttcgtcttcagcgaagct ctacagccaagcatcatcacagacgggttccggtatgctatcgccactggtaattggggg actggaacgaaccggagagtgggagtttcgcaagtgctcaaccgatatacctacgcatct accctctcccatcttcggcgtaccaacacgcctatcgatcgaggtagtaaagctaccaaa ccgcgtcaacttcacaatacccactggggtatggtatgccctgccgagacacccgaaggt gccgcttgtggactggtcaagaaccttgctcttctgtcatacatctcagtcgggtcctat gctgcgccagtgatggagtttctggaggagtggggtcttgaagaccaatcggagttccaa cacaaccccggtgccaccaaagtcttcgtcaacggtgtgtggatgggggtacatcgaaat gctggaaccctttacgccaacttactccagatgcgacgtggtggtcaactgaaacatgaa gtatcgattgtgcgggacattcgagagcgagagctacgattatgcaccgacgccggtcgt gtatgtcgaccattactcattgttgatcaacggacccagagtttgaaaattaaaaaatca catatcgaacgtacggagatactgctggaaggtggagaggacatcgccactggttcggca tggatcgaattgctcaacgatggtgtgatcgagtatgtggatgcggctgaagaagagaca attctcatcgctatgacttcggaggatttggtcaacgcacgaacggcaagtggtaaagat gagctagtgcgacaacgagctgcccataatttggatcatttcgatcccgccgcacgtgta aagagtaccaattggtctcagaattacacccacatggagattcatcctagtatgatcctc ggagtttgtgggagtatcattcctttccccgaccacaatcaatccccccgaaacacgtat caatccgctatgggtaaacaagccatgggagttcacttgacaaattatcaattacgaatg gacacaatggcaaatatcctgtactaccctcaaaaacccctggcgaccacacgatccatg gaatacctaaaattctcagaattgcccgcgggacaaaacgccatcgtagctatcatgtgt tactcgggatataatcaagaagattcagtcatcatgaatcagtcatctattgaccgagga ttgttcagatcgttgtattaccgatcatacacagatgcggagaagatgacggggatggag aaagtggaaactatcgagaaacctgatcgaaaagatacgttgagaatgaagatgggatca tcagatcgatatgccaagcttgacattgatggtcttatcgctcctgccaccaacgtcaat ggagatgatatcatcattggtaaaaccgctcccatacctgaagaaagcgaagaattagga cagagaacatctcttcatacgaaaagagatgtctccactcctcttaaaagtacagaacaa ggagtggtcgatcaagtcatgctatcaacaaatggtgacggtcataagtttgtaaaaatc agaatacgttcaactcgagtacctcaaataggtgataaattcgcctcgcgacatggtcaa aaaggtactatcggtatcacctacagacaagaagatatgccttttacagcagaaggtatc acaccggatatcatcatcaaccctcatgccatcccttctcgaatgactataggtcattta gtcgaatgtttattgtcaaaattatcaacaatgacaggatcggaaggtgatgctacacca ttcacagagttgacagtggagaaagtttccaaattcctcagacaaagagggtatcagagt agaggtttagaagtgatgtatcatggtcatacgggtaggaaattacaggctcagatatat tttggtccaacttattatcaaaggttaaaacatatggtggatgataagattcatgcgagg gctagaggacctttacagattctgactagacaaccggtggaaggtaggagtagagatggt ggtttgaggtttggagagatggaaagggattgcatgatttcacatgggatagcggcgttc ctcaaagagaggatgtatgactcttcggacggattcagagtccacgtatgcgatcaatgt ggtcttatggctattgccaatctcaaaaaacaagaattccattgttcggtatgtaggaat agtactcaaatctctcaaatttatatcccatacgcggccaagttattattccaggaactt caagcgatgaatatagcggtgaggatgtacggtgaagcggagtaa

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