Tremella mesenterica: TREMEDRAFT_72293
Help
Entry
TREMEDRAFT_72293 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tms
Tremella mesenterica
Pathway
tms03082
ATP-dependent chromatin remodeling
tms03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TREMEDRAFT_72293
03083 Polycomb repressive complex
TREMEDRAFT_72293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_72293
Enzymes [BR:
tms01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
TREMEDRAFT_72293
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
TREMEDRAFT_72293
HDAC complexes
Sin3A-HDAC complex
TREMEDRAFT_72293
BRAF-HDAC complex
TREMEDRAFT_72293
REST complex
TREMEDRAFT_72293
SHIP complex
TREMEDRAFT_72293
MiDAC complex
TREMEDRAFT_72293
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
TREMEDRAFT_72293
Heterochromatin formation proteins
Other heterochromatin formation proteins
TREMEDRAFT_72293
Chromatin remodeling factors
NuRD complex
TREMEDRAFT_72293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
18498717
NCBI-ProteinID:
XP_007007223
JGI:
Treme1_72293
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MMEPIPGESKKRVCYFFDSDIGNYHYGSGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKP
ATKREMSQFHTDEYVDFLHRITPENAHQFSKEQSKYNVGDDCPIFDGLFEYCSISAGGSM
EGAARLSRDKCDIAVNWAGGLHHAKKAEASGFCYVNDIVLGILELLRYHQRVLYIDIDVH
HGDGVEEAFYTTDRVMTASFHKYGEFFPGTGEVRDNGIGKGKGYAVNVPLRDGITDENYR
SIFQPVMTRIIDFYQPGAIVLQCGADSLSGDRLGSFNLSMRGHAACVQFIKSFNLPLLLL
GGGGYTVKSVSRTWAYETGLAAGVELRGGKLLLYYGPDYQLDVRPSNMTDHNTDEYLEKL
KETVFEVLRDNIAAPSVQMHVDPPQEVPKLSHDDGDDPDRDMEDPDHRDPRSARDVRIER
EGEYYDSDDEDMSERHRQSHRDPPTNGVIRRNRAESTSSTSSTNSAVRPSQSLPLIRSES
PYAPSHVNGNPSTRPIESPPSPPISTSDVRASAETTIVQPAPVPVGDAADVEMSDPSEPP
NPIVPSAVPPSHAVTIGDTDDPMSGELNGGPGVGDMIARGS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacctatccccggtgaaagcaagaaaagggtgtgctacttcttcgactcggac
attggaaattatcactatggctctggtcacccgatgaagccgacaaggatcagaatgtgt
cattctttggtgatgaactatgggttgtacaaaaagatggagatattccgagcgaaacca
gcgacaaaaagggaaatgtcacaattccacacggacgaatatgtcgatttcttacatcgc
ataacacctgagaatgcacatcaattcagtaaagagcagtccaagtataatgtcggagac
gactgtcctatctttgatggactgttcgaatattgttcaatatctgctggagggtcaatg
gagggtgctgctcgattgtcaagagataaatgtgatatcgccgtcaattgggctggagga
cttcatcatgcaaagaaagcagaggccagcgggttttgttatgtcaatgacatcgtactg
ggaatactagagctcttgagatatcatcaacgagtactttatatcgatattgacgtacat
catggagatggtgtcgaagaggctttctacacgaccgacagagtgatgactgcaagtttt
cacaaatacggagagttcttccctggaacaggagaagtgagggataatggtatcgggaag
ggtaaaggttacgctgtgaacgttccactccgagatgggatcaccgatgagaattataga
agtatctttcaacctgtgatgacccgtatcatcgacttttatcaacctggtgccatcgtc
ctacaatgtggagccgactctctctccggtgatcgactgggatctttcaatctttccatg
cgaggtcacgctgcctgtgtgcaattcatcaaatcgttcaatctgccattactcttactc
ggcggaggaggttacacggtcaaatcggtgtctcgaacttgggcatatgagactggtctt
gctgctggggtggaacttcgtgggggtaagctattactctattatggacccgactatcaa
ttggacgtacgaccgagcaatatgacggatcataataccgacgagtacctcgagaagttg
aaagagactgtcttcgaagtactacgagacaacatcgctgctccaagtgttcaaatgcac
gttgatcctccccaagaggttcccaaattatcacatgatgatggcgatgatcctgatcgg
gacatggaggatccagaccatcgtgatccaagaagtgccagggatgtgcgtatagaacgt
gagggagaatattacgattccgatgatgaagatatgagtgaaagacatcgacaatcgcac
agagatccacctaccaacggtgtcattcgacggaaccgagcagagtccacctcttcaaca
agctcgaccaacagcgcggtccgtccgtctcagtctctcccgttgatccgaagtgaaagc
ccctatgcaccgtctcatgtgaatggcaatccttcaacacggccaatcgagtcaccacct
tcaccgcctatcagtacgtctgacgtccgagcgtcagcggagaccacgatcgtccagccc
gccccagtaccagtcggtgacgccgccgacgttgagatgtcagatccttccgaacctccg
aatccaatagtaccttctgccgtaccccccagccatgcggtgactattggggacacggat
gatcctatgtctggagagctcaatggtggtcctggagtaggggatatgatcgctcgtgga
tcatga
DBGET
integrated database retrieval system
