Trichechus manatus latirostris (Florida manatee): 101340808
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Entry
101340808 CDS
T05135
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03266
Virion - Herpesvirus
tmu04145
Phagosome
tmu04151
PI3K-Akt signaling pathway
tmu04510
Focal adhesion
tmu04512
ECM-receptor interaction
tmu04640
Hematopoietic cell lineage
tmu04810
Regulation of actin cytoskeleton
tmu04820
Cytoskeleton in muscle cells
tmu05100
Bacterial invasion of epithelial cells
tmu05133
Pertussis
tmu05135
Yersinia infection
tmu05165
Human papillomavirus infection
tmu05168
Herpes simplex virus 1 infection
tmu05205
Proteoglycans in cancer
tmu05206
MicroRNAs in cancer
tmu05410
Hypertrophic cardiomyopathy
tmu05412
Arrhythmogenic right ventricular cardiomyopathy
tmu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
101340808
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101340808
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101340808
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101340808
09144 Cellular community - eukaryotes
04510 Focal adhesion
101340808
09142 Cell motility
04820 Cytoskeleton in muscle cells
101340808
04810 Regulation of actin cytoskeleton
101340808
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
101340808
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101340808
05205 Proteoglycans in cancer
101340808
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101340808
05165 Human papillomavirus infection
101340808
09171 Infectious disease: bacterial
05135 Yersinia infection
101340808
05133 Pertussis
101340808
05100 Bacterial invasion of epithelial cells
101340808
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101340808
05412 Arrhythmogenic right ventricular cardiomyopathy
101340808
05414 Dilated cardiomyopathy
101340808
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tmu04147
]
101340808
04515 Cell adhesion molecules [BR:
tmu04515
]
101340808
04090 CD molecules [BR:
tmu04090
]
101340808
Exosome [BR:
tmu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101340808
Cell adhesion molecules [BR:
tmu04515
]
Integrins
Integrin alpha subunits
101340808
CD molecules [BR:
tmu04090
]
Proteins
101340808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
101340808
NCBI-ProteinID:
XP_023584857
UniProt:
A0A2Y9QS47
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MGSRTPRSPLHVVQPRWSPRRRTLLPPLPLLLPLLLLLPPPPRVGGFNLDAEAPAVLSGP
PGSFFGFSVEFYRPGADGVSVLVGAPKANTSQPGVLQGGAVYLCPWGISASQCTPIEFDS
KGSRMLESSLSSPEGEEIVEYKSLQWFGATVRAHGSSILACAPLYSWRTEKEPLSDPVGT
CYLSTDNFTRILEYAPCRSDFSWAAGQGYCQGGFSAEFTKTGRVVLGGPGSYFWQGQILS
ATQEQIAESYYPEYLINLVQGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDFVAGVPK
GNLTYGYVTILNGSDVRSLYNFSGEQMASYFGYAVAATDINGDGLDDLLVGAPLLMERTA
DGRAQEVGRVYVYLQHPAGMEPTPSFTLTGHDEFGRFGSSLTPLGDLDQDGYNDVAIGAP
FGGETQQGVVFIFPGGPGGLGSKPSQVLLPLWAAGHTPDFFGSALRGGRDLDGNGYPDLI
VGAFGVDKAVVYRGRPIVSASASLTIFPAMFNPEERSCSLEGSPVACINLSFCLNASGKH
VPDTIGFTVELQLDWQKQKGGVRRALFLTSRQASLTQTLLIQNGAREDCREMKIYLRNES
EFRDKLSPIHITLNFSLDPQAPVDSHGLQPVLHYQSKSRIEDKAQILLDCGEDNICVPDL
QLEVFRTPPSREQNHYVYLGDKNSLNLTFHAQNVGEGGAYEAELRVTAPPEAEYSGLVRH
PGNFSSLSCDYFTVNQSRLLVCDLGNPMKAGASLWGGLRFTVPHLRDTKKTIQFDFQILS
KNLNNSQSDVVSFRLSVEAQAQVSLNGVSKPETVLFPVSDWHPRDQPQEEGDIGPAVHHV
YELINLGPSSISQGTLELSCPQALEGQRLLYVTRVIGLSNCTTSHPLNPQGLELDPMGSQ
HHQLQRREAPGRTPASSGPRILKCPEAECFRLHCELGPLHRQESQSLQLHFRVWSKTILQ
REHQPFSLQCEAVFKALKMPYRILPRQLPQKELQVATAVQWTKAEGSHGVPLWIIILAIL
IGLLLLGLLIYVLYKLGFFKRSLPYGTTMEKAHLKPPATSDA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggggagccggacgccaaggtcccctctccacgtcgtgcagccgcgctggagtccccgg
cgccgaactctgctgccgccgctgccgctattactgccgctgctgctgctgttgccgccg
ccaccccgggtcgggggcttcaacttagacgcggaggccccagcagtgctctctggaccc
ccgggctccttcttcggcttttcggtggagttttatcggccgggggcggacggggtcagt
gtgctggtgggagcacccaaggctaacactagccaacccggagtgctgcagggtggtgct
gtctacctctgcccctggggcatcagcgcctcacagtgcacccccatcgagtttgacagc
aaaggctctcgcatgctggagtcttcactgtcgagcccagagggagaggagattgtggag
tacaagtccttgcagtggttcggggcaacagttcgagcccatggctcctctatcttggcc
tgtgctccactgtacagctggcgcacagagaaggagccactgagcgatcctgtgggcacc
tgctacctctccacagacaacttcacccgaattctggagtatgcgccttgccgttcagat
ttcagctgggcagcaggacagggttactgccaagggggcttcagtgccgagttcaccaag
actgggcgtgtggtgctgggtggaccagggagctatttctggcaaggccagatcctgtct
gctacccaggagcagattgcagaatcctactaccccgaatacctgatcaacctggttcag
gggcagctgcagacacgccaggccagttccatctatgatgatagctacctgggatactct
gtggctgtgggtgaattcagtggtgatgacacagaagactttgttgctggcgtgcccaaa
ggaaacctcacctatggctatgtcaccatccttaatggctcagacgttcgatccctctac
aacttctcaggggaacagatggcctcctactttggctatgcagtggctgccacagacatc
aatggggatgggctggatgacctgctggtaggggcgccccttctcatggagcggacagcc
gacgggcgggcccaggaggtgggcagggtctatgtctacctgcagcacccagctggcatg
gagcccacacccagctttaccctcactggccatgacgagtttggccgatttggcagctcc
ttgacccccctaggggacctggaccaggatggctacaatgatgtggctattggagccccc
tttggtggggagacccagcaaggggtagtgtttatattccctgggggcccagggggactg
ggctctaagccctcccaggttctgctacccctgtgggcagctggccacaccccggacttc
tttggctctgccctgcgaggaggccgagacctggatggcaatggataccctgatctgatt
gtgggggcctttggtgtggacaaggctgtggtctacaggggccgccccatcgtgtctgcc
agtgcctccctcaccatcttccctgccatgttcaaccctgaggaacgcagctgcagttta
gaggggagccctgtggcctgcatcaaccttagcttctgcctcaatgcttctggaaaacac
gtccctgacaccattggcttcacggtggaactccagttggattggcagaagcaaaaggga
ggagtgcggcgggcgctgttccttacctcccgacaggcgagcctgacccagaccctgctc
atccagaatggggctcgggaggactgcagagagatgaagatctacctccggaacgagtca
gaattccgagacaaactctccccaattcacatcaccctcaacttctccctggacccccaa
gcccctgtggacagccatggcctccagcctgtcctacattaccagagcaagagccggata
gaggacaaggctcagatcctactagactgtggagaggacaacatctgtgtgcctgaccta
cagctggaagtgtttagaactcccccatccagggaacagaaccactatgtttaccttggc
gacaagaactccttgaacctaactttccatgcccagaatgtgggtgagggcggcgcctat
gaggctgagcttcgggtcacggcccctccagaggctgagtactcgggactcgtcagacac
cctgggaatttctccagcctgagctgcgactactttactgtgaaccagagccgcctgctg
gtgtgtgacctgggcaaccccatgaaggcaggagccagtctctggggtggccttcggttc
acagtccctcatctccgggacacgaagaaaaccatccagtttgactttcagatccttagc
aagaatctcaacaactcacaaagtgacgtggtctccttccggctctctgtggaggctcag
gcccaggtctccctcaacggtgtctccaagcctgagacagtgctattcccagtgagtgac
tggcatccccgagaccagcctcaggaggagggggacataggccctgctgtccaccacgtc
tacgagctcatcaacctgggccccagctccattagccagggcacactggagctcagctgc
ccccaggctctggaaggtcagcggctactctatgtgaccagggtcataggactcagcaac
tgcaccaccagtcaccccctcaacccacagggcctggagttggatcctatgggttcccag
caccaccaactgcaaagacgggaggctccaggccggacccctgcctcctcgggacctcgg
atcctgaaatgcccggaggccgagtgcttcaggctgcactgtgagctagggccactgcac
cggcaagagagtcaaagtctgcaacttcatttccgagtctggtccaagaccatcctgcag
cgggagcaccagccatttagcctgcagtgtgaggctgtgtttaaagccctgaagatgccc
taccgaatcctgcctcggcagctgccccaaaaggaacttcaagtggccacggccgtgcag
tggaccaaggcagaggggagccatggcgtcccactgtggatcattatcctagccattctc
attggccttctgctcctaggtctgctcatctacgtcctctacaagcttggattcttcaaa
cgatccctcccatacggcaccaccatggaaaaagctcacctcaagcctccagccacctct
gatgcctga
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integrated database retrieval system