Trichechus manatus latirostris (Florida manatee): 101341656
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Entry
101341656 CDS
T05135
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmu01009
]
101341656
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101341656
Protein phosphatases and associated proteins [BR:
tmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101341656
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101341656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_3
DUF6377
LYRIC
Drf_FH1
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
101341656
NCBI-ProteinID:
XP_004377605
UniProt:
A0A2Y9DP15
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MRTVRKWVLVQIFQVFCGLIQRTVTIVPGMDLLSGTYIFAVLLACVVFQSGAQEKNYTVR
EEMPENVLIGDLLKDLNLSLIPDKSLTSPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARI
DREKLCAGILVDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPEN
SAINSRYALPAAIDPDIGINGVQNYQLIKGQSIFGLDVIETPEGDKMPQLIVQKELDREE
KDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKEKEIEVSIPENAPVGTSVTQL
HATDADIGENAKIHFYFSNLVSNMAKRLFHLNNTTGLITIKEPLDREESPNHKLLVLASD
GGSMPARAMVLVNVTDVNDNVPSIDIRYIINPINGTVVLSENAPLNTKIALITVTDEDAD
HNGRVTCFTDHEVPFRLRPVFSNQFLLETAAYLDFESTREYAIKLLAADAGKPPLNQSSM
LLVKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADNGRNAEINYLLGSDAPS
EFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPPLMANATVLVTVLDQNDNSPIFT
HNEYNFYVPENLPRHGTVGLITVTDPDYGENSAVTLSILDVNDDFTIDPQTGVIRPNISF
DREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVVPSTNYSYELVPPSTNP
GTVVFKVIAVDSDTGMNAELRYSIVGGNTKDLFIIDQTTGNITLKEKCVAADLGLHRLVV
KAKDLGQPDSLFNIIIVNLFVNESVTNATLIHELVRKNIEKPVTQNIETTDASSPTSDYV
KIMVAIVAGTITVILVIFITAVVRCRQSPHLKAAQKNKQNSEWVTPNPENRQMIMMKKKK
KKKKKKHAPKNLLLNFVTIEEAKTDDADTDGNSITLDLPIELEEQAMGTYNWGTTPTTFK
PDSPDLARHYKSASPQPAFQIQPETPLNSKHQIIQELPLDNTFVACDSISKCSSSSSDPY
SVSECSYPVTTFKTPVSVHTRPPMKEVVRSHTPMKESTTVEIWTHPQPQRKSEGKKAGKS
QRRVTFHLPEGSQESGSDGGLGDHDAGSLPSTSHALPLGYPQEEYFDHAAPNNRTEGDGN
SDPESTFIPGLKKAAELTVQPTVEEASDNCTQECLILGHSDACWMPASLTHSSPSQAQAS
AHRCSPPVTQTIALCHSPPVTQAIALCHSPPPAQASALHRSPLLAQATGLCHSPPPAQAS
ALCYSPPLAQAAAIHCSPPLPQVAALHRSPAQPPMGLQQDWVQGAGPDGLQSFDQGGQGS
ARSQFYTMSERLHSSNDSVKVIPLTTFTPGQQARPSRGDSPIMEEHPL
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgtacgaaagtgggttttagttcagatatttcaagttttctgtgggttgata
cagagaaccgtcacaatcgtgcctggtatggacttgttgtccgggacgtatatatttgcg
gtcctgttagcatgcgtcgtgtttcagtctggcgcccaggagaaaaactacaccgtcaga
gaagaaatgccagaaaacgtcctgataggggacttgctgaaagaccttaacttgtcgcta
attccagacaagtccttgacatctcccatgcagttcaagctagtgtacaagactggggat
gtgccactgattcggattgaagagggtactggtgaaatcttcactaccggtgctcgcatt
gatcgtgagaagttatgtgctggtatcttggtagatgctcgttgcttttatgaagtggag
gttgccgttttgccggatgaaatatttagactggtaaagatacgttttctgatagaagac
ataaatgataatgcgccattattcccagcaacggttatcaacatatcaattccggagaac
tcagctataaattcccgatatgctcttccagcggccattgatcctgacataggaataaat
ggagtgcaaaactaccaactaattaagggtcagagtatatttgggcttgatgtcattgaa
acgccagaaggagacaagatgccacaactaattgttcaaaaggagttggatagggaagag
aaggatacatatgtaatgaaggtaaaggttgaagatggcggctttcctcaaagatccagt
actgctattttgcaagtaagtgtggctgatacaaatgacaaccacccagtcttcaaggag
aaggagattgaagtcagtataccagaaaatgctcctgtaggtacttcagtgacacagctc
cacgctacagatgccgacataggtgaaaatgccaagattcacttctattttagcaatcta
gtctctaacatggccaagagactatttcacctcaacaacactactggacttatcacaatc
aaagaaccactggatagggaagaatcaccaaaccacaaattgcttgttttggcaagtgat
ggtggatcaatgccagcaagagcaatggtgctggtaaatgttacagatgtcaatgacaat
gtaccttcaattgatataagatacatcatcaatccaatcaacggcactgtggttctttca
gaaaatgctccactcaacaccaaaattgctcttataactgtaacagatgaggatgctgac
cataatggaagggtgacatgcttcacagatcatgaagtccctttcagattaaggccagta
ttcagtaatcagttcctcctagagactgctgcatatcttgactttgagtccacaagagaa
tacgccattaaattactggccgcagatgctggcaaacctcctttgaatcaatcatccatg
ctcctcgtcaaagtgaaagatgaaaacgacaatgctccagttttcacccagcctttcata
agtctttctgttcctgagaataactctcctggcacccagctgacaaaaataagtgcaaca
gatgcagacaatgggcgtaatgctgagatcaattacctgctaggttctgatgctccatct
gaattcaacctggatcatcgtacaggcatcctgactgcagtgaagaaactggatagggaa
aaacaggaaaaatattctttcacagttctggcgaaagataatgggatgccacccttgatg
gccaatgccacagtcttagtgaccgttcttgatcagaatgacaacagcccaattttcact
cacaatgagtataacttctatgtccctgaaaaccttccaagacatggcacagtaggacta
atcactgtaactgatcctgattatggagaaaattctgcagtcactctctcgattttagat
gtgaatgatgatttcaccattgatccacagactggtgtcatccgaccaaatatttcattt
gatagagaaaaacaagaatcttatactttctatgtaaaggctgaggatggtggtagggta
tcacgttcttcaactgctaaagtgaccataaatgtggtcgatgttaatgataacaaacca
gtttttgttgtcccttctaccaactactcttatgaattggttccaccatccactaatcca
ggaacagtggtcttcaaggtaattgctgtcgatagtgacactggcatgaatgcagagctt
cgttacagcattgtaggaggaaatacaaaagatctgttcataattgaccagacaacaggc
aacattacactgaaggagaaatgtgtagctgcagatcttggtttacacagactggtagtc
aaagctaaggacttgggacaacctgattctctcttcaatattataatcgttaatctattc
gtgaatgagtcagtgacaaatgctacactgattcatgaactagtgcgcaagaatattgaa
aaaccagtgacccaaaatattgagacaactgacgcatcctcaccaaccagtgactatgtc
aagatcatggttgctattgttgctggcaccataactgtcatcctagtaattttcatcact
gctgtggtaagatgtcgccagtccccacatcttaaggctgcccagaaaaacaaacaaaat
tcagaatgggttactccgaacccagaaaatagacagatgataatgatgaagaagaagaag
aagaagaagaagaagaagcatgcccctaagaacctgttgcttaactttgtcactattgaa
gaagctaagacagatgatgctgacactgatggaaacagcatcaccttagaccttcccatt
gagctggaagagcaagccatgggtacctacaactggggtacaacacctactacttttaag
cctgatagccctgatttggcccggcattacaaatctgcctctccacagcctgccttccag
attcagcctgaaactcccctgaattcgaagcaccagatcatccaagaactgcctctcgat
aacacctttgtggcctgtgattccatttctaagtgttcctccagcagttctgatccctac
agcgtttctgagtgcagctatccagtgacaacctttaagacccctgtgtctgttcacacc
agaccgccaatgaaggaggttgtacgatctcacactcccatgaaagaatccaccactgtg
gagatctggactcatccccagccacagcggaaatctgagggaaaaaaagcaggaaagtcc
cagcgccgtgtcacatttcacctaccagaaggctctcaggaaagcggcagtgatggtggg
ctgggagaccatgatgcaggcagccttcccagcacatcacatgctctgcctcttggatat
cctcaggaggagtactttgatcatgctgcacccaacaaccgtactgaaggggatggcaac
tctgatcctgaatctactttcattcctggactaaagaaagctgcagaactgactgttcaa
ccaactgtggaagaggcctctgacaactgcactcaagaatgtctcatcctgggccattct
gatgcctgctggatgccagcttctttgacccattccagcccttcacaagcacaggcctct
gctcaccgctgcagccctccagtgacacagaccattgctctctgccacagccctccagtg
acccaggctattgcactgtgccacagccctccaccagcacaggcttctgctctccaccgc
agtcctcttctggcacaggctactgggctttgtcatagcccaccaccagcacaggcctca
gccctctgctacagccctcccttggcacaggctgctgcaatccactgcagccctcctctg
ccacaagttgctgccctccatcgcagccctgcacagccaccaatgggtttgcagcaagat
tgggtgcaaggtgctggacctgatggactacagtcttttgatcagggagggcaaggtagt
gcaagatctcagttttacaccatgtctgaaagacttcattccagtaatgattcagttaaa
gtcattcctctgaccaccttcaccccaggccaacaagccagaccctctaggggtgattcc
cccataatggaagaacatcccttgtaa
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