Trichechus manatus latirostris (Florida manatee): 101343863
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Entry
101343863 CDS
T05135
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101343863
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tmu00536
]
101343863
Glycosaminoglycan binding proteins [BR:
tmu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101343863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
DL-JAG_EGF-like
JAG1-like_EGF2
EGF_3
Motif
Other DBs
NCBI-GeneID:
101343863
NCBI-ProteinID:
XP_004375206
UniProt:
A0A2Y9DI75
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MCGVGWQTLSLSLGLVLAVLNEVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGTFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKSLTEIPT
NLPETITEIRLEQNSIKVVPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY
GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF
APLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF
RCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTA
ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGVFEGASGVNEILLTSNRLEN
VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSL
STLNLLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGN
DDNSCSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNY
KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND
ISAVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKL
LLTTPSKKFACQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDV
PIHACISNPCKHGGTCRLKEGEKDGFWCICADGFEGENCEVNIDDCEDNDCENNSTCVDG
INNYTCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGFKCDCTPGYIGEHCDID
FDDCQDNKCKNGAHCTDAVNGYTCICPEGYSGLFCEFAPPMVLPRTSPCDNFDCQNGAQC
IIRINEPICQCLPGYQGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQIATDEDSGI
LLYKGDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSV
DGGSPKIITNLSKQSTLNFDSPLYVGGMPGKNNVAAALRQAPGQNGTSFHGCIRNLYINS
ELQDFRKVPMQTGILPGCEPCHKKVCAHGRCQPSSQSGFTCECEEGWMGSLCDQRTNDPC
LGNKCVHGTCLPINAFSYSCKCLEGHGGVLCDEEADLFNPCQAIKCKQGKCRLSGLGQPY
CECSSGYTGDSCDREISCRGERVRDYYQKQQGYAACQTTKKVSRLECKGGCAGGQCCGPL
RSKRRKYSFECTDGSSFVDEVEKVVKCGCTRCPS
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggcgttggctggcagacactgtccctgtcgctggggttagtgctggcggtcctg
aacgaggtggcgccacaggcgtgcccggcgcagtgctcctgctcaggcagcaccgtggac
tgtcacgggctggcgttgcgcagcgtgcccaggaatattccccgcaacacagagaggctg
gatttgaatggaaataacatcacaaggattactaaaacagattttgctggtcttagacat
ctaagagttctacagcttatggagaataagattagcaccattgaaagaggagcattccag
gatcttaaagagctggagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgctgtttcttgggacttctaagctctacaggctcgatctcagtgaaaaccaaattcaa
gcaattccaaggaaggctttccgtggggcagttgatattaaaaatctgcaactggattat
aaccagatcagctgtattgaagatggaacatttagggctctccgggacctggaagtgctc
actctcaacaataacaacattactagactttctgtggcaagtttcaaccatatgcctaaa
cttaggacttttcgtctccattccaacaacttgtactgtgactgccacctggcctggctc
tctgattggctgcgccagaggcctcgggtcggcctctacacccagtgtatgggcccatcc
cacctgaggggccataatgtagctgaggttcagaaacgagaatttgtctgcagtgatgag
gaagaagggcaccagtccttcatggctccgtcttgcagcgttctgcactgcccagccgct
tgtacctgtagcaacaatatcgtagactgtcgtgggaaaagtcttactgaaatccccaca
aatctgccagagaccatcacagagatacgtttggaacagaactcaatcaaggtcgtccct
cctggagctttctcaccatataaaaagctcagaagaatcgacctgagcaataatcagatc
tccgaactagcaccagatgctttccaaggactacgctcactgaattcacttgtcctctat
ggaaataaaatcacagaactcccaaaaagcttatttgaaggactattttccttacagctt
ctattactgaatgccaacaaaataaactgccttcgagtagatgcttttcaggatctacac
aacttgaacctcctctccttatatgacaacaagcttcagactgtggccaaggggaccttt
gcacctctccgggccattcagactatgcatttggctcagaacccatttatttgtgactgc
catctgaagtggctggcggattacctccataccaacccaatagagacgagtggtgcccgc
tgcaccagcccccgccgtctggcaaacaaaagaatcgggcagatcaaaagcaagaaattc
cgttgttcagctaaagaacagtatttcattccaggtacagaagattatcgatcaaaatta
agtggagactgctttgcagatttggcttgccctgaaaagtgccgctgtgaagggaccaca
gtagattgctccaatcaaaaactcaacaaaatcccagaccacatcccccagtacactgca
gagctgcgtctcaataataacgaattcacagtgttggaagccactgggatctttaagaaa
cttcctcagttgcgtaaaataaactttagcaacaataagatcacagacatcgaagaggga
gtgtttgaaggcgcatctggggtaaatgaaatacttcttacaagtaatcgtttggaaaat
gttcagcataagatgttcaagggattggaaagcctcaaaactttgatgttgagaagtaat
cgcataagctgtgtagggaatgacagtttcataggactcagttctgtgcgcttgctttct
ctgtatgataatcaaattactacgattgcaccaggggcgtttgatacactccattcctta
tctactctaaacctgttggccaatccttttaactgtaactgccacctggcatggttggga
gagtggcttaggaagaaaagaattgtaacaggaaatcctcggtgtcagaaaccatacttc
ctaaaagaaatccccatccaggatgttgccattcaagacttcacttgtgatgatggaaat
gatgataatagttgttctccactctctcgctgccctacggaatgtacttgcttggataca
gtagtccgatgtagcaacaagggcttgaaggtcctaccgaaaggtattccaagagatgtc
actgagctgtatctggatgggaaccaattcacactggttcccaaggaactctctaactac
aaacatctaacacttatagacttaagtaacaaccgaataagcaccctttctaatcagagc
ttcagcaacatgacccagctcctcaccttgattctcagctacaaccgcctcagatgtatt
cctccccgaactttcgatgggttgaagtctcttcgattactttctttacatggaaatgac
atttcggctgtgcctgaaggtgctttcaatgatctttctgcactgtcacacctagcaatt
ggagccaaccctctttactgtgattgtaacatgcagtggttatcagactgggtaaagtca
gagtataaagaaccaggaattgctcgctgtgctggtcctggagaaatggcagataaatta
ttgctcacaacgccctccaaaaaatttgcatgccaaggtcctgtggatgttaatattctc
gctaaatgtaatccctgtttatcaaatccatgtaaaaatgatggcacctgcaacaatgac
ccagttgacttctatcgatgcacctgtccatacggtttcaaggggcaggattgcgatgtc
ccgatccatgcatgtatcagtaacccatgtaaacatggaggaacttgccgcttgaaagaa
ggagaaaaggatggattctggtgtatttgtgcggatgggtttgaaggagaaaattgtgaa
gtcaatatcgatgactgtgaagacaatgactgtgaaaataattctacatgcgtcgatgga
attaataactacacatgcctttgcccacccgagtacacaggtgagttgtgtgaggagaag
ctggacttctgtgcccaggatctgaacccctgccaacatgactccaagtgcatcctgacg
ccaaagggattcaaatgtgactgtactccaggatacataggcgagcattgtgacattgat
tttgacgactgtcaagataacaagtgtaaaaacggagcccattgcaccgatgcagtaaat
ggctatacctgcatctgccccgaaggttacagtggcttgttctgtgagtttgctccaccc
atggtcctccctcgtaccagcccctgtgataatttcgattgtcagaacggagctcagtgc
attatcaggataaatgagccaatatgccagtgtttacccggctaccagggagagaagtgt
gaaaaattggtcagtgtgaattttgtaaacaaagaatcttaccttcaaatcccttcagcc
aaagttcgacctcaaacgaacatcactcttcagattgccacagatgaagacagtggaatc
ctcctgtataagggtgacaaagaccacatagcggtagagctgtatcggggacgtgttcgt
gccagctatgacaccggctctcacccggcttctgccatatacagtgtggagacaatcaat
gatggaaacttccatattgtggaactgcttgccctggatcagagtctctccctctccgtg
gatggagggagccccaaaatcatcaccaatttgtcaaagcagtccaccctgaattttgac
tccccactctatgtaggaggcatgcctgggaagaacaatgtggcggccgccctgcgccag
gcccctgggcagaacggcaccagcttccatggatgcatccgaaacctgtacatcaacagc
gagcttcaggacttccggaaggtgcccatgcaaacaggcatcctgcctggctgtgagcca
tgccacaagaaggtgtgtgcccatggcaggtgccagcccagcagccagtctggcttcacc
tgtgagtgtgaggaaggatggatggggtccctgtgtgaccagaggaccaatgacccctgt
ctgggaaacaagtgtgtccatggtacctgcctgcccatcaatgcattctcctacagctgt
aagtgcctggagggccacggaggcgtcctgtgcgatgaagaggcagatctgtttaacccc
tgccaagccatcaagtgtaagcagggaaagtgtaggctttcaggacttggacagccctat
tgtgaatgcagcagtggttacactggggacagctgtgatcgggaaatctcttgtcgaggg
gaacgggtacgagattattaccaaaagcagcagggttacgctgcttgccaaaccaccaag
aaggtgtcccgattggaatgcaaaggtgggtgtgctggcgggcagtgctgtggacctctg
aggagcaagagacggaaatactcttttgaatgcactgatgggtcttcgtttgtggacgag
gttgagaaggtggtgaagtgcggctgtacgagatgtccctcctag
DBGET
integrated database retrieval system
