Trichechus manatus latirostris (Florida manatee): 101344921
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Entry
101344921 CDS
T05135
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101344921
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101344921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
101344921
NCBI-ProteinID:
XP_004389316
UniProt:
A0A2Y9E9B2
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MIVLLFFALLWMVEGVFSQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTVPNSR
TPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLENPLELFRVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRF
AELVLEKPLDREQQAVHRYVLTAVDGGGGGEGGGGGGGGGGLPPQQQRTGTALLTIRVLD
SNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRARELFG
LSPRTGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFST
VKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLGDVPFRLKSSFKNYYTIVTEAPLD
REAGDSYTLTVVARDRGEPALSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGAYI
YAVSATDRDEGANAQIAYSILECQIQGMSVFTYVSINSENGYLYALRSFDYEQLKDFSFQ
VEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLLTR
VAAVDADDGENARLTYSIVRGNEMNLFRMDWRTGELRTARRVPAKRDPQRPYELVIEVRD
HGQPPLSSTATLVVQLVDGAVEPPGGGGSGGGGSGEHQRPSRSGGGETSLDLTLILIIAL
GSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCGGGGSTCCGRQARARKKKL
SKSDIMLVQSSNVPSNPAQVPVEESGGFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSP
SRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSNETKHQRAELSYLVDRPRRVNSSAFQE
ADIVSSKDSGHGDSEQGDSDHDATNRGQSAGMDLFSNCTEECKALGHSDRCWMPSFVPSD
GRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHSTLERKDLDGLL
SNTRAPYKPPYLNHFHHLSYFVHWK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattattctttgccttgctctggatggtggagggagtattttcccagctt
cactacacggtgcaggaggagcaggaacatggcactttcgtggggaatatcgctgaagat
ctgggcttggacattacaaaactttcagctcggaggtttcagacagtgcccaactcaagg
accccttacttggacctcaacctggagaccggggtgctgtacgtgaacgaaaagatcgac
cgcgagcaaatttgcaagcagagcccctcctgcgtcctgcacctagaggtcttcctggag
aaccccctggaactgttccgggtggagattgaggtcttagacatcaatgacaaccccccc
tccttcccagagccggacttgacggtggagatatccgaaagcgccacgccaggcacccgc
ttccctttggagagcgcattcgacccagacgtgggcaccaactccctgcgcgactacgag
atcacccccaacagctacttctccctggacgtgcagacccagggggatggcaaccgattc
gccgagttggtgctggagaagcctttggaccgagagcagcaagcggtgcaccgctacgtg
ctgaccgcggtggacgggggaggaggaggagaaggaggcggcggcggcggcgggggaggg
ggcctgcccccccagcagcagcgcaccggcacagccctactcaccatccgagtgctagac
tccaacgacaacgtgcccgccttcgaccaacccgtctacactgtgtccctaccagaaaat
tcgcccccgggcacgctcgtgatccagctcaacgccacggacccagacgagggccaaaac
ggcgaggttgtgtactcttttagcagccacatctcgccccgggcgcgggagctcttcgga
ctctctccgcgcaccggccggctggaggtgagcggcgagctggactatgaagagagcccg
gtgtaccaagtgtacgtgcaagccaaagacctgggccccaacgccgtgcccgcgcactgc
aaggtgctagtgcgagtgctagatgctaacgacaacgcgccggagatcagtttcagcacc
gtgaaggaggcagtgagcgagggcgccgcgcccggcacagtggtggccctgtttagcgtg
acagaccgcgactccgaggagaatgggcaggtgcagtgtgagctgctgggggacgtgccg
ttccgcctcaagtcttccttcaagaactactacactatcgtgactgaggcccccctggac
cgagaggcgggtgactcctacaccctaaccgtggtggcccgggaccggggcgagccggcg
ctctccactagtaagtcgattcaggtgcaagtgtcagatgtgaacgacaatgcgccacgc
ttcagccagcctgtctacgacgtgtatgtgaccgagaacaacgtgccaggagcctacatt
tacgcggtgagcgccacggaccgcgatgagggtgccaacgcccagatagcctactccatc
ctcgagtgccaaatccagggcatgagcgtcttcacctacgtgtccatcaactccgagaac
ggctacttgtacgccctgcgctccttcgattatgagcagctcaaggacttcagctttcag
gtggaagcgagggacgccggcagcccccaggcgctggcgggcaacgccacggtcaacatc
ctcatcgtggatcagaacgataatgctcctgccatcgtggcgcccctcccagggcgcaac
gggactccagcgcgcgaggtgctgccccgctcggcggagccgggttacctactcacccgc
gtggccgcggtggacgcggatgacggcgagaacgcccgactcacctacagcatcgtgcga
ggcaacgaaatgaacctcttccgcatggactggcgcaccggggagctccgcacagcgcgc
cgggtgccagccaagcgcgacccccagcggccttacgagctggtgatcgaggtgcgcgac
cacgggcagccgcccctgtcctccacagccactctggtggtgcagctggtggatggcgcc
gtggaacccccgggagggggtgggagcggtggtggggggtcgggggagcatcaacgcccc
agccgctctggtggcggggagacctcactggacctcaccctcatcctcattatcgcactg
ggctcagtgtccttcatcttcctgctggcgatgatcgtgctggccgtgcgttgccaaaag
gagaaaaagctcaacatctacacgtgtctggccagcgattgctgcctctgctgctgctgc
tgcggcggtgggggctcgacctgctgcggccgccaagcccgggcgcgcaagaagaaactc
agtaagtccgacatcatgctggtacagagctcaaacgtacccagtaacccggcccaggtg
cctgtagaggagtccgggggctttggctcccaccaccacaaccagaattactgctaccag
gtctgcctgaccccagagtccgccaagaccgatctgatgttccttaagccctgcagcccc
tctcggagtacggacactgagcacaacccctgcggggccatagtcaccggctacaccgac
cagcagcccgacatcatctccaatggaagcattttgtccaacgagactaaacaccagcga
gcagagctcagctatctagttgacagacctcggcgagttaacagttctgcattccaggaa
gctgacatagtaagctctaaggacagtggtcatggagacagtgagcagggagatagtgat
catgatgccaccaaccgcggccagtcagctggtatggatctcttctccaactgcactgag
gaatgtaaggctctaggccactcagatcggtgctggatgccttcttttgtcccttctgat
ggacgtcaggctgctgattaccgcagtaatctgcatgttcccggcatggactctgttcca
gacactgaggtgtttgaaactccagaagcccagcctggggcagagaggtctttctccacc
tttggcaaagagaaggcccttcacagcactctggagaggaaagatctggatggactgctg
tctaatacacgagcgccttacaaaccaccatatttgaatcattttcatcatctttcttat
tttgtacattggaagtaa
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