Trichechus manatus latirostris (Florida manatee): 101345934
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Entry
101345934 CDS
T05135
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
101345934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101345934
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Cadherin related
101345934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_4
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
101345934
NCBI-ProteinID:
XP_004389098
UniProt:
A0A2Y9E9R0
LinkDB
All DBs
Position
Unknown
AA seq
3295 aa
AA seq
DB search
MQKKSGIAPSCTGMQPLLLLPLWLLLLLLLEAGVPGVWGQAGSLDLQIDEEQPAGTLIGD
ISAGLPAGTAAPPMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDREQRDRYRFTAVTPD
GATVEVTVRVADINDHAPAFPQARAALQVPEHTALGTRYPLEPARDADAGHLGTQGYALS
GDGAGETFRLETRPGPDGAPVPELVVAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDV
TLLDINDHTPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDG
PFSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMT
VIFLSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYL
VCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQVFQPEPLP
EVALPGSFVARVMARDPDQGTNGQVTYSLAPGAHTHWFSIDPTSGIITTAALLDYELEPQ
PQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTAT
DADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQGPSSFDFTVTAVDGG
GLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSYH
ILAGNSPPLFALDEHSGLLSVAWPLTRRANSVVQLEIGAQDGGGLQAEPSARVNISIMPG
TPTPPVFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLGPVTLALSGGDPRGLFSLDGAS
GLLQTVRPVDRELLGPVLELEVRAGSGMPPAFAVARVRVLLDDVNDNTPAFPAPEDTVLL
PPSTAPGSLIYTLRALDPDSGVNSRVTFTLLAGGGGTFTVDSNTGHVRLVGPLGPPGGPA
HELELEARDGGSPPRTSHFRLRVVVQDLGTHGLTPHFDSTTYRVDLPSGTTPGTQVLQVQ
ARAPDGGPVTYHLAADGASSLFGLEPQSGWLWVRAALDREVQELYTLKVMAVSGSKAELG
QQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPSGTGVGRISATDRDSGPNGRLTYS
LRQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSYQLLVQVQDGGRPPRSTTGTVHIAVLD
LNDNSPTFLHASGAAAGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGAEL
FSLHPHSGELLTAAPLIRAERPHYVLTLSAHDQGSPPRSASLQLLVQVLPSARSAEPPPN
SAEPDPAAPVPVVLTVTAAEGLQPGSLLGSVAPPEPTGVAALTYTLVGGADPEGTFALDA
ASGRLYLARPLDFEAGPAWRALTVRAEGPGGAGARLLRVQVRVQDENDHAPAFARDPLAL
ALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEPPVPALRLDARTGALSAPRGLDR
ETTPALLLLVEATDRPANASRRRTARVSARVFVTDENDNAPVFVSPSRVRLPEDQPSGHV
ALHVVARDPDLGEAARVSYRLAAGGDGHFRLHSSTGALSVVRPLDHEQRAEHVLTVVASD
HGSPPRSATQLLTVSVADVNDEAPAFQQQEYRVLLRENSPPGTSLLTLRATDPDLGANGQ
VTYGGVSGESFSLDPDTGVLTTLRVLDREEQEEINLTVYARDRGSPPLLTHVTVRVTVED
ENDHAPTFGSAHLSLEVPEGQEPQTLTTLRASDPDVGANGQLQYRILDGDPSGAFVLDIA
SGEFGTMRPLDREVEPAFQVKIEARDGGQPALSATLLVTVTVLDANDHAPAFPVSAYSVE
VPEDAPAGTLLLQLQAHDPDAGPNGRVTYYLGAGATGAFLLEPGSGELRTAAVLDREQCP
SYAFSVSAVDGAAAGPLSTTVPVTITVRDVNDHTPTFPTSPLRLRLPRPGPSLSTPTLAL
ATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPAALGPRDRVLFIVATDL
GRPARSATGVVVVGLQGESERGPRFLRASSEVVLRENAPPGTPIVSPKAVHAGGSNGPIT
YSILSGNEKGIFSIQPSTGAITVRSAEGLDFEASPRLRLVLQAESGGAFAFSVLTLTLQD
ANDNAPRFLQSHYVAFLPESRPLEGPLLQVEADDLDQGSAGQISYSMAASQPARGLFHLD
PATGTITTTAILDREIWAETWLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPWEL
RVPEDALLGSEIAQVTGNDVDSGPVLWYVLNPSGPQDPFSVGRYGGRVSLTGPLDFEKHD
RYYLQLLAHDGPHEGCANLTVLVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDR
DSGANGHVSYHLASPAEGFSVDPNNGTLFMTVGTAALGQEGPGVVDVVLEARDHGAPGRA
ARATVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDADGSRTHAAVDYSIV
SGNRGRVFQLEPRLAEAGAGGGPGPQALGCLVLLEPLDFESMTQYNLTVAAADRGQPPRS
SAVPVTITVLDVNDNPPVFTRASYRMAVPEDTPVGAELLHVEASDADPGPHGLVHFTLSS
GDPLGLFELDESTGALRLARALDCETQARHQLVVQAADPAGAHFALAPVTIEVQDVNDHG
PAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSS
TGELRARVPFDYEHTGSFWLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVP
EGARRGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGALYLRVDSQAPGSGTGT
SGGGGRTRREAPREMRLEVVARGPLPASRSATVPVTVDITHTALGLAPDLNLLLVGAVAA
SLGVVVVLALAALVLGLVRARNRKAEAAPGPMSQAATLASGSLQKLGREPPSPPPSEHLY
HQTLPSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLAAR
GPDSGIQQDADGLSDTSCEPPAPDMWYKGRKAGLLLPGTGATLYREEGPPATSTAFLGGC
GLSPAPTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFTEI
ARLKDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAAARAIFPPASHRSPISHEG
SLSSAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSSESGLEPPDDTELHI
NT seq
9888 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaagtcgggcattgccccttcctgcactggcatgcagcccctactgctgcta
ccattgtggctgctactgctgctgctgctggaagcaggggtgccaggtgtctggggtcag
gccgggagcctggacctacaaattgatgaggagcagccagcaggcaccctgatcggggac
atcagtgcaggactgccggcgggcacagcagcgcctcccatgtacttcatctctgcccag
gagggcagcggtgtgggcacagacctggccatcgatgaacacagcggtgttgtccgtaca
gcccgtgtcttggaccgtgagcagcgggaccgctaccgcttcactgcagtcactcctgac
ggtgccaccgtggaagttacagtgcgggtggctgacattaatgaccatgctcctgccttc
ccacaggctcgggctgccctgcaggtccctgagcatacagctcttggcacccgctacccg
ctagagcctgctcgtgatgcagatgctggccacctaggaacccagggctatgcgctctct
ggcgatggagctggagagaccttccggctggagacacgccccggtccagatggggctccg
gtgcccgagctggtagttgccggggagctggaccgagaaaaccgctcacattacatgctg
cagctagaagcctatgatggaggttcacccccgcggagggcccaggccctgctggacgtg
acactactggatatcaatgaccacaccccggctttcaaccagagccgctaccacgctgtg
gtgtctgagagcctggcccctggcagccctgtcctgcaggtgtttgcatccgatgccgat
gctggtgccaatggggctgtgacttacgagatcaaccggaggcagagtgaaggtgatgga
cccttctctatcgatgcacacacggggctgctacgattggagcggccactggacttcgag
caacggcgggtccatgaactggtggtgcaggcacgggatggaggggctcacccagagctg
ggctcagcctttgtgactgtgcacgtgcgagatgccaacgacaatcagccctccatgact
gtcatcttcctgagtgcagacggctccccgcgagtgtccgaggctgccccacctggccag
cttgtcgctcgcatctctgtgtcagacccagatgatggtgactttgcccatgtcaatgtt
tccctggaaggcggtgagggtcactttgccctgagcacccaagacagcgtcatctacctg
gtgtgtgtggctcggcggctggatcgggaggaacgagatgcctataacttgcgggttacc
gcgacagactcaggctccccgccactgcgggccgaggctgcctttgtgctgcacgtcact
gatgtcaatgacaacgcacctgcctttgaccgccaggtcttccaacctgagcccctgcct
gaggttgcgctgcctggcagctttgtggcacgggtgatggctcgggatcctgaccagggc
accaatggacaggtcacctatagcctagcccctggtgctcacacccactggttctccatc
gaccccacctcaggcatcatcaccacggcagccttgctggactatgagttggaacctcag
ccacagctaatcgtggtggccacggatgggggcctgccccctctagcctcctccgccaca
gttagtgtggccctgcaagatgtgaatgacaatgagccccagttccagaggactttctac
aatgcctcactgcctgagggtacccagcctggaacctgcttcctgcaggtgacagccaca
gatgcggacagtggcccatttggcctcctctcctattccttgggtgctgggcttggggct
tcagggtctcctccgttccgcatcgatgcccacagtggtgacgtgtgcacgacccggacc
ctggaccgtgaccagggaccctcaagcttcgacttcacagtgacagctgtggatgggggg
ggcctcaagtccatggtatatgtgaaggtgtttgtgtcagatgagaatgacaacccacct
cagttttatccacgggagtatgctgccagtctcagtgcccagagtacaccaggcacagct
gtgctgagggtgcgggcccatgaccctgaccaggggcctcacgggcggctctcctatcac
atccttgctggcaatagccccccgctctttgccttggatgagcactcagggctgctgtca
gtagcctggcccttgaccagaagggctaactctgtggtgcagctggagatcggggctcag
gatggaggtggcctgcaagcagagcccagtgccagagtcaacatcagcattatgccagga
acccctacaccacctgtatttgagcagctacagtatgtcttttccgtgccagaggatgtg
gcaccaggcaccagtgtgggcatagtccaggcacacaacccaccaggtcgcttgggaccc
gtgacccttgccctatcaggcggggatccccggggactcttctccctagatggggcctca
gggttattacaaacagttcgccctgtggaccgggagctgctgggaccagtgctggaactg
gaggtgcgggcgggcagtggcatgcccccggcttttgctgtggctcgggtgcgtgtgctg
ctggatgatgtgaatgacaatacccctgcctttcctgcacctgaagacacagtgttgctg
ccaccaagcactgccccaggatccctcatctataccctgcgggctctggaccccgactca
ggtgttaatagtcgagtcacctttactctgcttgctgggggtggtgggaccttcaccgta
gactccaacacgggccatgtacgccttgtgggacctctggggcccccaggggggccagcc
catgagctcgagctggaggcccgagatgggggctctccaccacgcactagccactttcga
ctgagggtggtggtccaggacttggggacccatgggctgactccccactttgacagcact
acctaccgtgtggacctgccctcgggcaccacccctgggactcaggtcctgcaagtgcag
gcccgagcacctgatggaggtcctgtcacctaccatcttgcagcagatggggcaagtagc
ctctttggcctggagccacagagtgggtggctgtgggtacgggcagcattggaccgtgag
gtccaggagttgtacacgctaaaggtaatggcagtgtctgggtccaaagctgagttgggg
cagcagacaggcacagccactgtgagggtcagcatcctcaaccagaatgaccacagtccc
cgcttgtctgaggaacccaccttcctggctgtggctgagaaccagccctcagggaccggt
gtgggccggatctctgccactgaccgagactcaggtcccaatggacgtctgacctacagt
ctgcgacagctgtcagaagacagcaaggccttccgcatccacccccagactggagaagtc
accacactgcaaaccctggaccgtgagcagcagagtagctaccaactcctggtgcaggtg
caagatggagggaggccaccccgcagcaccacaggcaccgtgcacattgcagtgcttgac
ctcaatgacaacagccccacctttctgcacgcttcaggggctgctgctggtggccttcct
atacaggtaccagaccgtgtgcctccgggaacactggtgacgactctgcaggccaaggat
ccagatgagggggagaacgggaccatcctatacacgctaacaggtcctggcgcagagctt
ttctccctgcacccacattctggggagctgctcactgcagcacccctgatccgagcagag
aggccccactacgtactgacactgagcgctcatgaccaaggcagtccccctcgaagcgcc
agcctccaactcctggtgcaggtgctcccctcggctcgctccgccgagcctccaccgaat
tccgctgaaccggatcccgcggcgccggtgcctgttgtcctgacggtgacggcagccgaa
gggctgcagcccggctccctgttaggctcagtggcgccgccagagccgacgggggtggcc
gcactcacttacacactggtgggcggcgccgaccccgagggcacgttcgcgctggacgcc
gcctcggggcgcttgtacctggcgcggcccctggacttcgaggcgggcccggcgtggcgc
gcgctcacggtgcgtgccgagggacccggaggcgcgggcgcgcggctgctgcgagtacag
gtgcgcgtgcaggacgagaacgatcacgcgcctgcctttgcgcgagacccgctggcgctg
gcactgccggagaaccccgagcccggcgcggcgctgtacactttccgcgcgtcggacgcg
gacggcccgggccccaacagcgacgtgcgctaccggctgctgcgccaggagccgccggtg
cctgcgcttcgcctggacgcgcgcaccggggctctcagcgctccgcgtggcctggaccgg
gagaccacacccgcgctcctgctgcttgtggaagcgaccgaccggcccgcgaacgcaagc
cgccgacgcacagcgcgagtatccgcgcgcgtgttcgtcacggatgagaatgacaatgcg
cccgtcttcgtttcgccctcccgggtgcgcctccccgaggatcagccatctgggcacgtg
gcactgcacgtggtagcccgggacccggacttgggcgaggctgcacgagtgtcctatcgc
ctggcagctggcggggacggccacttcaggctacattcgagcactggagcgctgtccgtg
gtgcggcctctggaccacgagcagagagctgaacacgtcctgacggtggtggcctcagac
cacggctccccgccgcgctcggccacgcagctcctgactgtcagtgtcgccgatgtaaac
gacgaggcaccagctttccagcagcaggaatacagggtcctcttgcgtgagaacagcccg
cctggcacatctctactcactcttagagcaaccgacccagacctgggggccaacgggcaa
gtgacttacggaggtgtctcaggagaaagcttctccctggacccagacactggagttctc
acgactcttcgagtcctggatcgggaggagcaggaagagatcaacctgacagtgtatgcc
cgggacaggggctcacctcccctattgacccatgtcacagtgcgggtgactgtggaggat
gagaatgaccatgccccaacctttgggagtgcccacctctctctggaggtgcccgagggc
caggaaccccagactcttaccacattgcgggcctctgaccctgatgtgggagccaatggg
cagctgcagtaccgcatcctagatggagacccatcaggagcctttgtcctagatatagct
tctggggagttcggcaccatgaggccactggaccgggaggtggagccagcattccaggtc
aagatagaggcccgggacggaggccagccagctctcagtgccactttgcttgtgacagtg
acagtgctggatgccaatgatcatgcaccagccttccctgtgtcagcctactctgtggag
gtgcctgaggatgcacctgcagggaccttgctgctgcaactacaggctcatgaccctgat
gctgggcccaacggccgtgtgacctactacctaggtgcgggtgcaacaggagccttcctg
ctcgaaccgggctctggggaactgcgcacagccgcggtgctggatcgagagcagtgtccc
agctatgcgttttctgtgagtgcggtggatggtgcagctgctgggcccctgagcaccaca
gtgccagtcaccatcactgtgcgtgatgtcaatgaccacacacccaccttccccactagt
cccctgcgactccgcctgccccgcccgggccccagcctcagcaccccaaccctggctctg
gccacgctgcgagctgaagaccgtgatgctggtgccaatgcctccatcctataccggctg
gctggcacaccgccacctggcaccactgtggactcttacactggtgaaatccgtgtggcc
cgctcccctgcagccctgggtccccgggatcgcgtcctcttcatcgtggccacggacctt
ggacgtccagctcgctctgccactggtgtggttgttgttgggctgcagggagagtctgag
cgtggaccccgctttctccgggctagtagtgaggtcgtgctccgtgagaatgcaccacca
gggactcccattgtctcccccaaggctgtccatgcagggggttcaaatggaccgatcacc
tacagcattctcagtgggaatgaaaaagggatattctcgatccagcctagcacaggagcc
atcacagttcgctcggcagaggggctggactttgaggcaagcccacggctgcgactagtg
ctgcaggcagagagcggaggagcctttgccttctcagtgctgaccctgacactgcaagat
gccaatgacaatgctccccgcttcctgcagtcccactatgtggccttcctgcccgagtcc
cggccattggaggggcccctgctgcaggtggaggcagatgacctagatcaaggctctgct
ggacagatctcctacagtatggccgcatcccagccagcacggggattgttccatctagac
cctgccacaggcaccatcactaccacagccatcctggaccgtgagatctgggcagaaaca
tggcttgtactgatggccacagacagaggaagcccagccctggtgggctcagctaccctg
acggtgatggtcatcgacaccaatgacaatcgccccaccattccccagccctgggagctc
cgagtgccagaagatgcactgttgggctcagagattgcacaggtaacagggaatgacgtg
gactcgggaccagtgttatggtatgtgctgaacccatctgggccccaggatcccttcagc
gttggccgctatgggggccgcgtctccctcacaggccccctggacttcgaaaagcatgac
cgctactacctgcagctgctggcgcacgacgggcctcacgagggctgcgccaatctcaca
gtgcttgtagaggatgtcaatgacaatgcacctgccttctcacagagcctctaccaggtc
accctccttgagcacacacccccaggcagtgccattctctctgtctctgccactgaccgg
gactcaggtgccaatggtcacgtctcctaccacctggcttcccctgctgaggggttcagc
gttgaccccaacaacgggaccttgttcatgacggtaggaacagcggccttgggccaggag
ggaccaggagtagtggatgtggtgctggaagcacgcgaccatggggcaccaggccgggca
gcacgagccacagtgcacgtgcagctgcaggaccagaatgaccatgccccgagcttcaca
ttgccacactaccgcgtggctgtgactgaagacttgccccctggctccaccctacttacc
ctggaggccacagatgctgatgggagccgcacccatgctgctgtggactacagcatcgtc
agtggcaaccggggccgagtcttccagctggagccccggctagctgaggctggggcgggt
ggtggaccaggcccccaagcactgggctgcctggtgctgcttgagcctctggacttcgag
agcatgacccagtacaatctaacagtggctgcagctgaccggggacagccacctcgcagc
tcagcagtgccagtcaccatcactgtgctggatgtcaatgacaatccacctgtcttcacc
cgggcatcctaccgtatggcggtacccgaggacacacctgttggagctgagctgctgcat
gtggaggcctctgacgccgaccccggtcctcatggccttgtgcacttcaccctcagctcg
ggtgaccctttggggctctttgagctggatgagagtacaggggccttgcgcctggcccgc
gccctggactgtgagacccaggctcgacatcagcttgtagtgcaggctgctgacccagcc
ggggcacattttgctctggcaccggtgacaattgaggtccaggatgtgaatgaccatggc
ccagccttcccactgagcttgctcagcaccagcctggcagagaaccagcctccgggcact
cttgtcaccactctgcatgcaattgatggagatgccggggcttttgggaggctccactac
agcctgttggaggccgggccgggacccgagggccgggaggcatttgccctgaacagttca
acaggggagttgcgggcacgagtgccctttgactatgagcatacaggaagcttttggctg
ctagtaggggctgctgatgctgggaatctctcagcctcggtcaccgtgtcagtgctggtg
accggcgaggatgagtatgaccccgtattcctggctccagctttccatttccaagttcca
gaaggtgcccggcgtggtcacagcctgggtcacgtgcaggctacagacgaggatgggggt
gccgacggcctggtactctattcccttgccacctcttccccctattttggtatcaaccag
actacaggtgccctgtacttgcgagtggacagccaggcaccaggcagtgggacaggcacc
tctgggggtgggggccggacccggcgtgaggcaccacgggaaatgaggctggaggtggtg
gcacgggggccgctgcctgcctctcgaagtgccacagtgcctgtgactgtggatatcacc
cacactgccctgggcctggcacctgacctcaacctgctattggtgggggctgtggcagcc
tcgctgggagttgtggtggtgcttgcactggcagccctggtcctcgggctggtgcgggca
cgaaaccgcaaggctgaggcagcccctggcccaatgtcccaggcagcaaccctggccagt
ggctccctgcagaagctgggccgggagccacccagcccacctccctcagagcacctgtat
caccagactctccccagctatggtggaccaggagctggaggaccctacccccgtggtggc
tccctggacccttcacactcaagtggccgaggttcagcagaggctgccgaggatgatgag
atccgcatgatcaatgagtttccccgtgtggccagtgtggcctcctccctggctgcccgt
ggtcccgactcgggcatccagcaggatgcagatggactgagtgacacatcctgcgagcca
cccgcccctgacatgtggtataagggccgcaaggcagggctgctgctgccaggcacggga
gccactctgtaccgagaggagggcccccccgccacctccacagcattcctggggggctgt
ggcctgagccccgcacccactggggactatggcttcccagcagatggcaagccatgcgtg
gcaggtgcgctgacagccatcgtggctggcgaggaggagctccgaggcagctataattgg
gactacctgctgagctggtgccctcagttccagccgctggccagtgtcttcacagagatc
gcccggctcaaggatgaagctcggccatgtcccccagctccccgtattgacccaccaccc
ctcatcaccgctgtggcccacccaggagccaagtctgtgccgcctaagccagccagcaca
gctgcagccagggccattttcccaccagcctctcaccgctcccccatcagtcacgaaggc
tccctgtcctcagctgccatgtcccccagcttctcgccctcactgtctcctctggctgct
cgctcacccgtcgtctcaccatttggggtggcccagggcccctcagcctcggcactcagc
tcagaatctggcctggagccgcctgatgacacagagctgcacatctag
DBGET
integrated database retrieval system
