Trichechus manatus latirostris (Florida manatee): 101347767
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Entry
101347767 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101347767
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101347767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
101347767
NCBI-ProteinID:
XP_023591276
UniProt:
A0A2Y9RCR0
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
METGERSAQQTRQVLLFFVFLGGALVSSETWRYSVAEETKIGSFIANIVKDMDSGVKDLA
ARGARVISDDFTSPLRLDPQTGNLLINERLDREALCDLTEPCILHFQVLFENPLQFFRAE
LWVRDINDHTPTFLDRHILLKIPESAAPGSLFPMERAQDFDVGKNGVQNYTISPNPHFHL
KLQDSDHGRKYPELVLDQSLDREKEPELSFTLIALDGGSPPRSGTALIHVVVVDVNDNAP
QFERPVYEVQVPENSPLDSLFITVTATDLDAGINGELSYSFTHASRDIRKTFEMHPISGE
VHLKALLDFELIQSYTINIQATDGGSLSGKSAILVQVVDVNDNPPEIDMTSLTSPIPENS
APETVVAVFRVQDKDSGDNAKTVCSIQDNLPFLLKPTFKNFYTLVTERPLDREIRTEYNI
TITVTDLGTPRLKTEHNITVLVSDVNDNTPTFTQNSYTLFVRENSRPVMQIGSVRALDRD
FGTNSQVSYSLLPPQDPHFHLASLVSIGSDNGHLFALRSLDYEALRAFEFRVGAADAGSP
ALSSEALVRVVVVDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXEPGLFSVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPMSASV
TLHVLLVDGFSQPYLPLPEVAPDEAQADSLTVCLVIALASVSSLFLFSVLLFVAVWLCRR
NRAASVGRCSVPESHFPGHLVDVSGTGTLTQSYQYEVCLTGGSGTNEFRFLKPVIPNLAP
QGAETEIEESSTFLNGFWFN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgggagagcggagcgctcagcagacaaggcaagtgctgcttttctttgttttc
ctgggaggggctctagtgagttctgagacctggcgctattctgtggcagaggaaacgaag
atcggctcctttatagccaacatagtgaaagatatggattccggtgtgaaagacttggct
gcgcggggagccagagtcatctctgatgactttacatcacctttgcggttggatccgcaa
actggcaacttgctcataaatgagcgattggaccgggaggcactttgcgatctcactgag
ccatgtatattgcatttccaagtgttatttgaaaatcctttgcaattttttcgggctgag
ctttgggtcagagacataaatgatcacactcccacgttcctagacaggcatatacttttg
aaaatcccagaaagtgctgctccaggatccttgttcccaatggagagggctcaggacttc
gatgtaggaaagaatggtgtccaaaactacacaatcagccccaatccccatttccacctt
aaattacaagacagtgatcacggcagaaaatacccagagctggtgctggaccaatctctg
gatagagaaaaggagcctgagcttagttttaccctaatagccttggatggcggatctccg
cccaggtccgggactgcactgattcacgttgttgtcgtggatgtcaatgacaacgccccc
cagtttgagaggccggtctatgaagttcaggtaccagagaacagccctctggactccttg
ttcatcacggtaactgctacagatttagatgcaggtataaatggagaactatcttattca
tttactcacgcctccagagatatacggaaaacatttgaaatgcatccaatttctggcgaa
gtccatttaaaagcacttttggattttgagttaattcagtcttatacaataaatattcag
gccactgacggtgggagcctttctggaaaatcagccattctagttcaggttgtagatgtg
aatgacaacccaccagaaatagacatgacatctcttaccagccccatacccgaaaactcc
gcgcctgagacggtggtcgcagttttcagagtgcaagataaagactctggggacaacgcg
aagacggtttgctcaattcaggacaatctcccctttctcctgaagcctaccttcaagaat
ttctacaccctagtcacagagcgtccactggacagagagatcagaacagaatataacatc
accatcaccgttactgacttgggtacccctagactgaaaaccgagcacaacataaccgtc
ttggtctccgacgtcaatgataatacacccacattcacccaaaactcatacaccctgttt
gtccgggagaacagtagacccgtcatgcaaatcggaagcgtgagggccttagatagagat
tttggcaccaattcccaggtctcctattccctgctgccgccccaggaccctcacttccac
cttgcctccttggtctccatcggctcggacaacggacacctgtttgctctgaggtcgctg
gattacgaggccctgcgagcgttcgagttccgcgtgggcgcggcagacgcaggctccccg
gcgctgagcagcgaggcgctggtgcgcgtggtggtcgtggacacaannnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggagcccgggctgttcagc
gtgtgggcacacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgctgcc
aagcacagactcgtcgtgctggtcaaggacaatggcgagccgccaatgtcggccagcgtc
acgttgcacgtgctcctggtggacggcttctcgcagccctacctgccgcttcctgaggtg
gccccggacgaggcccaggccgactcgctcacggtctgcttggtcattgcgttggcgtct
gtctcgtcgctcttcctgttctccgtgctcctgttcgtcgcggtgtggctgtgcagaagg
aacagggccgcctcggtgggtcgctgctcggtgcctgagagccactttccgggccacttg
gtggatgtcagcggcaccgggaccctgacccagagctaccagtacgaggtttgtctgaca
ggaggttctgggacaaatgagttcaggttcttgaagccggttatccccaacctcgcaccc
cagggagctgaaacggaaattgaggaaagctccacctttcttaatggcttctggttcaat
tag
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