Trichechus manatus latirostris (Florida manatee): 101352471
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Entry
101352471 CDS
T05135
Name
(RefSeq) synaptopodin 2-like protein isoform X1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
Calsarcin
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101352471
NCBI-ProteinID:
XP_004383281
UniProt:
A0A2Y9DY51
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MGAEEEVLVTLSGGAPWGFRLQGGAEQRKPLQVSKIRRRSQAGRAGLRERDQLLAINGVS
CTSLSHASAMSLVDDSGNQLVLTVRRVGDERPVRSPSPGELQVLSPLSPLSPEPPGAPVP
QSLQPGSLRSPPDSEAYYGETDSDADGPATQEKTRRPRRRGPTRPTPPGAPPDEVYLSDS
PAEPAPAIPGLPSQGDSRVSSPSWEDGAALHPPPAEALLLPHGPLRPGPNLIPMVGPVPH
PVAEDLTTTYAQKAKQAKLQRAESLQEKSVKEAKTKCRTIASLLTAAPNPHSKGVLMFKK
RRQRAKKYTLVSFGAAAGTGAEEEDGVPPTSESELDEEAFSDARSLTNQTDWDSPYLDME
LAKPGSGTAEGQGPGLGGQLTEASGRGVQLFEQQRQRAASSTQELAQDGPPATLNGKGLQ
SPPRAQNAPPEAAVPPPSPLPAVAASPRPFLPGGGAPSPSPGIFNRSARPFTPGLQGQRP
GTTSVIFRPLAPKRGNENLGGLSAPPPPFLPTPQGPTPLPSFTPGVPSHVPASSSPSTPR
SSGPVTATSSLYIPAPSRPVTPGGAPEPPTSPSAAAMTSTASIFLSAPQLSAARPEALVP
GRAAPEPPSAREQRISVPAARTGILQEARRRGTRKQMFRPGKEETKNSPNPELLSLVQNL
DEKPRAGGAESGPEEDVLSLGAEACNFMQPPGGRSYKTPPPMTPKTPPPMAPKSPPPKTP
KTPPPVAPKPLSRESLDGLMNGGVPSSGTPEPPRLQGRGGELFAKRQSRADRYVVEATPG
PGLGLGPRPRSPSPTPSLPSSWKYSPNIRAPPPIAYNPLLSPFFPQAARTLPSKAQSQGP
RAAKQGIKVIDFMRHQPYQLKTAMFCFDEVPPTPGPTTSGPPKTARVQEIRRFSTPAPQP
TAEPLAPTVLAPRAATTLDEPIWRTELASAPVPSPAPTPESPRGLGASPSSCGFQVARPR
FSATRTGLQAHVWRPGAGHQ
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgaggaagaggtgctggtcacactgtcagggggagcaccctggggcttccga
ctccaggggggggccgagcagaggaaacctttacaggtgtccaagatccggagacggagc
caggctggcagagcaggactccgagagagagaccagctcttggccatcaatggggtctcc
tgcaccagcctttctcatgccagtgccatgagcctcgttgatgactcaggaaaccagctt
gtcctcactgtgcggcgggtaggggacgaaaggcctgtgcgatctccatcccctggtgag
cttcaggtgctgtcacccttgtctccgctgagtcccgagccccccggtgctccagttccc
cagtctctgcagcctgggagccttcgctcacctcctgacagtgaggcttactatggagag
acagacagtgatgctgatggccctgctacccaggagaagacccgccgaccccgccgccga
ggccccacgaggcccacccctccaggagctccacctgatgaagtgtacctatctgacagt
cctgcagagccagcccctgccatccctggtcttcctagccagggtgacagccgtgtgagc
tccccatcttgggaggacggggcagcccttcacccacccccagccgaggccctgctgttg
ccccatggacccctccggcctggtcctaacctcattcctatggtggggcctgttccccac
ccagtggcagaagatcttactaccacctacgcccagaaggccaagcaagcaaaactgcaa
cgcgcagagagcctccaagaaaagagtgtgaaggaagccaagaccaaatgccggacgatt
gcatccctgctaaccgctgctccgaacccccattccaagggagtacttatgtttaagaaa
cggcggcagagagccaagaagtacacgctagtgagtttcggggctgcagctgggacaggc
gccgaggaggaggacggtgtcccccccacaagtgagtcagagctggacgaagaggccttc
tccgacgcccgtagcctcaccaatcagactgactgggacagcccctatctggacatggag
ctggccaagccaggctcaggcacagctgagggccagggcccggggcttggagggcagctg
actgaggcctccgggagaggggtccagctctttgaacagcagcgccagcgcgcagcctcc
agcacccaggagctggcccaggacggcccaccagccacgctcaatgggaagggcctgcag
tcaccccctcgggcccagaatgcacccccggaggcagctgtgcccccacctagccctttg
ccggccgttgcggccagccccagaccctttcttcctggtggtggagccccttccccatct
cctggtatctttaaccggtcagccaggccatttaccccaggcttacaagggcagcggcca
ggtaccacctcggttattttccggcccctagcccccaagagggggaatgaaaacctcgga
ggcctcagcgctcccccaccccccttcttgcccactccgcaggggcccactcctttgcct
agtttcaccccaggggttcccagtcacgtgccagcctccagttcccccagcactccgcgc
tcctcgggccctgtgacggccaccagctccctgtacatcccagcccctagtcggcctgtg
actccaggcggtgccccagagccccccacttcccctagcgcagctgccatgacctccacc
gcttctatcttcctgtcggcgcctcagctatcagctgcacgcccagaggcgctcgtcccg
ggccgagctgcacctgagccccccagcgcacgggagcagcgcatctcggtgccagctgcc
cgcacgggcatcctgcaggaggcccggcgccgggggactcggaagcagatgttccgacca
ggaaaggaggagacgaagaactcgcccaaccccgagttactatcgctggtgcagaacttg
gatgaaaaaccccgggccgggggtgctgaatctggtcctgaggaggacgttctgagcctc
ggggcagaagcctgcaacttcatgcagccaccagggggcaggagttacaagaccccgcct
cctatgacacctaaaaccccgcctccaatggctcccaagagtccaccccctaagactcct
aagactccgcccccggtagctcctaagccgctatctcgggagtcccttgatgggctgatg
aatgggggagtcccttcgtctggaacccctgagccaccaaggctgcagggcaggggtggg
gagctgtttgccaagcggcagagccgcgcagacaggtatgtggtggaagctacacctggt
cctggccttggccttggcccacggcccagaagcccttctcctactccttcactgccctca
tcctggaaatattcccccaatatccgtgctccacctcctattgcttacaacccactgctc
tcaccctttttccctcaggctgcccgaactctcccgagtaaggctcagtcccaggggcct
cgggcagccaagcagggcatcaaggttattgatttcatgaggcaccagccctaccaactt
aaaactgccatgttctgttttgatgaggttcccccaactccaggccccactacttcgggg
ccccccaaaactgcccgagtccaggagatccgcagattttccactccagcgccccagccc
actgcagagcccctggcccccacagtgcttgccccacgagcagccactacactagatgag
cctatctggaggacagagttggcctcagcccctgtccctagcccagctcctactccagag
tctcccaggggccttggagcctcccccagctcctgtggcttccaggtagccaggcccagg
ttctcagccaccagaacgggattgcaggctcatgtgtggaggcctggggcagggcaccag
taa
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