Trichechus manatus latirostris (Florida manatee): 101353161
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Entry
101353161 CDS
T05135
Name
(RefSeq) protocadherin beta-11
KO
K16494
protocadherin beta
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101353161
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101353161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
101353161
NCBI-ProteinID:
XP_004381164
UniProt:
A0A2Y9DV80
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MENGGPGALRIRQVLLLFVLLGMSEVGSESGRFSVAEEMQSGSFIGNVAKDLGLEVGELS
LRGAQVVSKDNKQHLQLDVNTGDLLLSETLDREELCGSTQPCVLHFQVLMKNPLQFFQIE
LEVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGVNTLKNYTVSPYSNFHV
KMRVNPDNRKYPELVLDKALDYEEQPEFSFILTALDGGSPPRSGTALVRVVVVDINDNSP
EFEQPFYEVKIPENSVLGSPVVTVSAWDLDSGTNGEISYTLSHASEDICKTFEINQKSGE
VSLTALLDFETIESYSIIIQATDGGGLFGKSAVRIQVMDVNDNLPEVTVSSIISPIPENS
PETVVVVFSILDRDSGDNGRMICSIPEDLPFMLKPSVENYYTLETERTLDRESRAEYNIT
ITVTDLGTPRLKTQHNIILLVSDVNDNAPTFAQTSYTLFIRENNSPALHMGSVSATDRDS
GTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALRTFEFRVGATDAGSPA
LSSEAPVRVVVVDENDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFSVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPMLASVTLQV
LLVDSFSQPYLPLPEVAADKTQADSLTVYLVIALASVSLLFLFSVLLFVAVRLCRRNRAA
SLGRRSVPEGHFPDHLVDVSGTGTLSQRYLYEAFLTGSSETSEFKFLKPIIPNFPPQGPG
KERKESPSFRNSFGFNIQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggagggccaggcgctctacggataaggcaagtcctgcttctctttgtcttg
ctgggaatgtctgaggtgggctctgagtcagggcgcttttctgtcgcagaggaaatgcag
agcgggagctttataggtaatgtggcaaaagacttgggactggaggtgggggagctatcc
ttgcgtggggcacaagtggtctctaaggataacaaacagcatttgcaactggatgtaaac
acgggagatttgctcctaagcgaaacactagaccgggaagagctctgtggctccacccag
ccatgtgtgctgcatttccaggtgttaatgaaaaaccccttgcagttttttcaaattgag
ctcgaggtcagggacataaatgatcattctcccgtttttctggaaaaagaaatgctccta
gaaatcccagagaacagtcctgtcggtgctgtgttcttactagaaagtgcaaaggatttg
gatgtaggagtcaacactctaaaaaactacacagtcagcccctactctaatttccacgtt
aaaatgagagtcaatccagacaataggaaatacccagagttggttttggacaaagcactg
gattacgaagagcagcctgagttcagtttcatcctcactgctctagatggcggctctccg
cccagatccgggactgccttggttcgagtcgtggttgtggacattaacgacaactcccct
gagtttgaacagcccttttatgaggtgaagattccagagaatagcgtcttaggttcgcca
gttgtgactgtgtcagcttgggatttagactcaggaacaaacggggaaatatcatacact
ttgtcccatgcctcagaagatatttgcaaaacatttgaaattaatcaaaagtctggagaa
gttagtctaaccgcactcttggattttgaaacaattgaatcatactcgataatcattcaa
gccacagatggaggtggcctttttggaaaatcagcagtaagaattcaggtgatggatgtg
aatgacaatcttcccgaagtcaccgtgtcatcaattatcagcccaatccctgaaaattca
cctgagactgtggttgtggtttttagtatcctagacagagattccggggacaacgggaga
atgatttgttctatcccagaagacctcccatttatgctaaaaccttccgttgagaattac
tacacattggaaacggagagaacactggacagagaaagcagagccgagtacaacatcacc
atcaccgtcacagacttgggtacccccaggctgaaaacacaacacaacataatcttgctc
gtctccgacgtcaatgacaacgcaccgaccttcgcccaaacctcctacaccctcttcatc
cgtgagaacaacagccccgccctgcacatgggcagcgtcagcgccacagacagagactca
ggcaccaacgcccaagtcacctactcgctgctgccgccccaggacccgcacctccctctc
tcctccttggtctccatcaacgcggacaacgggcacctgttcgctctcaggtcgctggat
tacgaggccctgagaaccttcgagttccgcgtgggcgcgacagacgcaggctctccggcg
ctgagcagcgaggcgccggtgcgcgtggtggtcgtggacgaaaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctctgcgccctgcaccgagctggtgcccagggcggct
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcctaccagctgctcaaggccacggagcccgggctgttcagcgtgtgggcgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgccgccaagcacagactc
gtcgttctggtcaaggacaatggcgagccgccaatgttggccagcgtcacgctgcaagtg
ctccttgtggacagtttctcgcagccctacctgccactgccggaggtcgccgcggacaag
acccaggccgactcgctcacggtctacttggtcattgcgttggcgtcggtctcgttgctc
ttcctgttctccgtgcttctgttcgtcgctgtgcggctgtgcaggaggaacagagctgcc
tcgctgggtcgccgctcggtgcctgagggccactttccagaccacttggtggacgttagt
ggcacagggactttgtctcagaggtacctctatgaggcgtttctgacgggaagctcagaa
acaagtgagtttaagttcttgaagccaattatccccaatttcccgccccagggccctgga
aaagaaagaaaggaaagtccttccttccgcaatagctttgggttcaatattcagtga
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